| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4549707 | 386 (0.810) | 3 (0.010) | 3/108 | NT | 0.84% | coding (111/462 nt) | yjiG | SpmB family inner membrane protein |
| ? | CP009273 | = 4549730 | 339 (0.740) | coding (88/462 nt) | yjiG | SpmB family inner membrane protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 422 total aligned reads displayed.
CCCACCCAGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGACGTTT > CP009273/4549663‑4549797 | ccacccaGTCGATCAGTCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGc > 1:16982886‑M2/1‑67 (MQ=255) acccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGca < 1:21265174‑M2/67‑3 (MQ=255) cccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagc > 1:16219881/1‑68 (MQ=255) cccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagc > 1:14139038/1‑68 (MQ=255) ccaTTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagca < 1:1609026/68‑1 (MQ=255) ccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagca > 1:12775347/1‑68 (MQ=255) ccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagca < 1:20551342/68‑1 (MQ=255) ccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagca > 1:23213721/1‑68 (MQ=255) ccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagca > 1:26853954/1‑68 (MQ=255) ccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagca > 1:38058938/1‑68 (MQ=255) ccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGgcagca > 1:10941060/1‑68 (MQ=255) ccaGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGAAAAACGCCATCACCACGTTTGgcagca > 1:7261301/1‑68 (MQ=255) caGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGcagcag < 1:3868888/68‑1 (MQ=255) cGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTg > 1:2628396/1‑68 (MQ=255) cGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTg > 1:237168/1‑68 (MQ=255) cGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTg > 1:30578369/1‑68 (MQ=255) cGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTg > 1:33290409/1‑68 (MQ=255) cGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTg > 1:881805/1‑68 (MQ=255) cGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTg > 1:38311056/1‑68 (MQ=255) gAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTgg < 1:2507929/68‑1 (MQ=255) gAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTgg < 1:14307069/68‑1 (MQ=255) gCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGt < 1:31555677/67‑1 (MQ=255) gCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGt < 1:37837690/67‑1 (MQ=255) gCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTc > 1:33410318/1‑68 (MQ=255) aGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGt > 1:16630119/1‑68 (MQ=255) aGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGt > 1:36726149/1‑68 (MQ=255) aGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGt > 1:19472583/1‑68 (MQ=255) ccGGTAATTTTCTGCGCCTGAATGATGACAAACGCCATCACCACGATTGGCTGCAGGTTGGTCGTg < 1:6714853/66‑1 (MQ=255) ccGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTgg < 1:14390623/67‑1 (MQ=255) ccGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTgg < 1:5342894/67‑1 (MQ=255) ccGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTg < 1:6100814/66‑1 (MQ=255) ccGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTg < 1:17665680/66‑1 (MQ=255) ccGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTg < 1:19244917/66‑1 (MQ=255) tAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGAt < 1:4854255/67‑1 (MQ=255) aaTTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATa < 1:31964716/67‑1 (MQ=255) aaTTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATa < 1:19932131/67‑1 (MQ=255) aaTTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATa < 1:37232324/67‑1 (MQ=255) aaTTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAg > 1:28846923/1‑68 (MQ=255) aaTTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAg < 1:12131102/68‑1 (MQ=255) ttttCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTa < 1:21837688/68‑1 (MQ=255) tttCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTaa > 1:24149193/1‑68 (MQ=255) ttCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTaaa > 1:18810493/1‑68 (MQ=255) ttCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTaaa > 1:12455569/1‑68 (MQ=255) ttCAGCGCCTGAATGAAGACACACGCCAGCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTa < 1:2978762/66‑1 (MQ=255) tCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTaaa > 1:35189190/1‑67 (MQ=255) tCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTaaa > 1:12941950/1‑67 (MQ=255) cAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGc < 1:13287231/68‑1 (MQ=255) aGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGcc > 1:6957707/1‑68 (MQ=255) cTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGgc < 1:5410251/68‑1 (MQ=255) cTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGgc < 1:34852854/68‑1 (MQ=255) cTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGGCGTGGCGATAGTAAAGCCACGgc < 1:30787984/68‑1 (MQ=255) atgatgACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGgcgcgc > 1:11920548/1‑68 (MQ=255) tgatgaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGgcgcgc > 1:3028480/1‑67 (MQ=255) gatgaCAAACGCCATCACCACGTTTGGcatcattcaggcgctgaaaattaccggcctgctcgactggg < 1:11723508‑M2/68‑42 (MQ=255) gatgaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGgcgcgcg > 1:32393794/1‑67 (MQ=255) gatgaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGgcgcgcg > 1:15019007/1‑67 (MQ=255) tgaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGcc < 1:11162781/67‑1 (MQ=255) gaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCCCGGCGCGCGCCa > 1:9740917/1‑67 (MQ=255) gaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCa > 1:17806643/1‑67 (MQ=255) gaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCa > 1:32273528/1‑67 (MQ=255) gaCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCAt < 1:5738066/68‑1 (MQ=255) aCAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATc > 1:24671391/1‑68 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATc < 1:22663854/67‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATc < 1:17358698/67‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATc < 1:14611899/67‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATc < 1:31051011/67‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:9163372/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:22978176/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:34182584/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:32193551/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:13563006/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:28319775/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:3615901/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:3664412/68‑1 (MQ=255) cAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCg < 1:37623143/68‑1 (MQ=255) aaaCGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGa < 1:29240313/68‑1 (MQ=255) aaCGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGAt < 1:39470348/68‑1 (MQ=255) cGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATaa < 1:15467678/68‑1 (MQ=255) cGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATaa < 1:20722155/68‑1 (MQ=255) gCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATaaa < 1:8207311/68‑1 (MQ=255) gCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATaaa < 1:7688827/68‑1 (MQ=255) gCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATaaa < 1:27756199/68‑1 (MQ=255) gCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATaaa < 1:6479465/68‑1 (MQ=255) gCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATaaa < 1:10090701/68‑1 (MQ=255) cATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAAc < 1:21636475/67‑1 (MQ=255) cATCACCACGTTTGGCAGCAGGGTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACa < 1:10366371/68‑1 (MQ=255) tCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACata < 1:16392680/68‑1 (MQ=255) accacGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACatat > 1:27979784/1‑67 (MQ=255) accacGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACatat > 1:26547151/1‑67 (MQ=255) accacGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATc < 1:4043796/68‑1 (MQ=255) accacGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATc < 1:33929492/68‑1 (MQ=255) ccacGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATcc < 1:34596628/68‑1 (MQ=255) caggTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCa < 1:39108848/65‑1 (MQ=255) cacGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCa < 1:27200235/68‑1 (MQ=255) tttGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGAc > 1:26005808/1‑68 (MQ=255) tttGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGAc > 1:32602343/1‑68 (MQ=255) tttGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGAc > 1:35561265/1‑68 (MQ=255) tttGGCAGCAGGTTGGTCGAGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGAc > 1:22334587/1‑68 (MQ=255) ttGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGAc < 1:10612494/67‑1 (MQ=255) gcagcaGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGACGttt > 1:18219308/1‑68 (MQ=255) | CCCACCCAGTCGAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGTCGTGGCGATAGTAAAGCCACGGCGCGCGCCATCGATAAACATATCCATGACGTTT > CP009273/4549663‑4549797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |