| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1101408 = | 166 (0.350) | 24 (0.060) | 8/94 | NT | 14.7% | coding (133/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit |
| ? | CP009273 | 1101450 = | 139 (0.350) | coding (175/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit | |||||
Only 100 of 333 total aligned reads displayed.
GGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > CP009273/1101383‑1101515 | gCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGa > 1:33170834/1‑68 (MQ=255) gCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGa > 1:8704455/1‑68 (MQ=255) ccATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGAt > 1:10539164/1‑68 (MQ=255) ccATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGAt > 1:8148308/1‑68 (MQ=255) ccATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGAt > 1:12257858/1‑68 (MQ=255) ccATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGAt > 1:22699868/1‑68 (MQ=255) acggcatgccccgtagggcaatcGCCCTGCTGGATGGTTGTTGAAAAGTCAGGCAACAGCAGGGCGAt < 1:31826662‑M1/45‑1 (MQ=255) ggcatgccccgtagggcaatcGCCCTGCTGGATGGTTGTTTAAAAGTCAGGCCACAGCAGGGCGAtt < 1:13301981‑M1/46‑1 (MQ=255) ttCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc < 1:2608288/68‑1 (MQ=255) ttCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc < 1:2427521/68‑1 (MQ=255) tCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGcc < 1:5585949/68‑1 (MQ=255) tCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:12759458/1‑67 (MQ=255) tCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:4066275/1‑67 (MQ=255) tCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:38810922/1‑67 (MQ=255) catgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGc < 1:28759442‑M2/6‑1 (MQ=255) catgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGc < 1:32105731‑M2/6‑1 (MQ=255) catgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGc < 1:17513864‑M2/6‑1 (MQ=255) cATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:3496988/1‑66 (MQ=255) aTCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCt < 1:20380279/68‑1 (MQ=255) aTCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCt > 1:15282197/1‑68 (MQ=255) cgcgCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTAc < 1:30425375/68‑1 (MQ=255) cccgtagggcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACg < 1:8453669‑M1/54‑1 (MQ=255) cgcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACgg > 1:14835590/1‑68 (MQ=255) gcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACggg < 1:11536831/68‑1 (MQ=255) agggcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑Ca < 1:8555178‑M1/59‑1 (MQ=255) cGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CAt > 1:32779616/1‑68 (MQ=255) gggTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATg < 1:18409623/68‑1 (MQ=255) ggcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CAt < 1:25496010‑M1/60‑1 (MQ=255) gcaatcgccctgctgttgcctgacttttaaacaagcaccccgccgggcGATTGCCCTACGGGG‑CAt < 1:34028612‑M2/18‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATg < 1:17969945‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATg < 1:37099613‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATg < 1:13800043‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATg < 1:10904609‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATAGCCCTACGGGG‑CATg < 1:29346224‑M1/61‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGcc < 1:36145970/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGcc < 1:25043522/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGcc < 1:29692662/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGcc < 1:34062638/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGcc < 1:28034468/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGcc < 1:19168807/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCg > 1:16687252/1‑68 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCg > 1:15070135/1‑68 (MQ=255) atcgccctgctgttgcctgacttttaaacaagcacccagcagggcGATTGCCCTACGGGG‑CATGCCGt < 1:33621629‑M2/23‑1 (MQ=255) atcgcccggctgttgcctgcctttaaaacacgcatccagcagggcGATTGCCCTACGGGG‑CATGCCGt < 1:17278247‑M2/23‑1 (MQ=255) cGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGtt < 1:15845855/68‑1 (MQ=255) GCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGttat < 1:9052131‑M1/68‑1 (MQ=255) CCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGttatt < 1:32901154‑M1/68‑1 (MQ=255) CCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGttatt < 1:31117307‑M1/68‑1 (MQ=255) CCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGtaatt < 1:18573470‑M1/68‑1 (MQ=255) CCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGttatt < 1:24574867‑M1/67‑1 (MQ=255) CCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGttatt < 1:738144‑M1/67‑1 (MQ=255) GCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGGCTTGCCgttattag < 1:29521950‑M1/67‑2 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGTCGGGATTACGCtt < 1:28599436‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:11909715‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:15331839‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:1942903‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:27211057‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:4714296‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:3016157‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:34271903‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:36515579‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:25721552‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCtt < 1:10201141‑M1/68‑1 (MQ=255) aTGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCa > 1:14174777/1‑68 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAgg < 1:5258867/68‑1 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAg > 1:25874138/1‑67 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAg > 1:2616411/1‑67 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAg > 1:23509062/1‑67 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAg > 1:27117528/1‑67 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAg > 1:29867576/1‑67 (MQ=255) tGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGGAGGCGa > 1:37253265/1‑68 (MQ=255) tttAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGa > 1:10927399/1‑66 (MQ=255) ttAAACGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATc < 1:22050609/67‑1 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:13961648/1‑67 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:7204405/1‑67 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:24026037/1‑67 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:20795134/1‑67 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTaaa < 1:35624189/66‑1 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAg > 1:22349242/1‑67 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAg > 1:31553493/1‑67 (MQ=255) aaCAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGcc < 1:13037975/68‑1 (MQ=255) aCAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCg > 1:27587365/1‑68 (MQ=255) agcagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTa > 1:3763024‑M2/9‑68 (MQ=255) gcagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCCGGCGATCTTCCCGCTAAAGCCGTAg > 1:14706346‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:2889724‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:2161177‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:26785451‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:33786849‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:35725328‑M2/8‑68 (MQ=255) cagggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:32555447‑M2/62‑1 (MQ=255) agggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg < 1:37975022‑M2/61‑1 (MQ=255) agggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg < 1:8335369‑M2/61‑1 (MQ=255) agggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:26323506‑M2/62‑1 (MQ=255) agggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:23708892‑M2/62‑1 (MQ=255) agggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:5495481‑M2/62‑1 (MQ=255) agggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:5004150‑M2/62‑1 (MQ=255) agggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:35832478‑M2/62‑1 (MQ=255) ggcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGc > 1:21026936‑M2/4‑67 (MQ=255) gcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcac > 1:34642351‑M2/3‑68 (MQ=255) gcGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGc < 1:6628246‑M2/64‑1 (MQ=255) | GGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGG‑CATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > CP009273/1101383‑1101515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |