| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 267 (0.560) | 14 (0.040) | 5/94 | NT | 6.3% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 190 (0.480) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 324 total aligned reads displayed.
ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTG > CP009273/1314742‑1314875 | tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:26491609‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:6183502‑M1/48‑1 (MQ=255) ttgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACcga < 1:22452936‑M2/5‑1 (MQ=255) ttgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACcga < 1:33957911‑M2/5‑1 (MQ=255) tgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:39185033‑M1/52‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:27434658/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:17873758/1‑68 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacga < 1:13346675/68‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacga < 1:38658173/68‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:751835/67‑1 (MQ=255) ggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGata < 1:23517913/67‑1 (MQ=255) ggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGata < 1:37482922/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:18643869/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:17426196/67‑1 (MQ=255) cgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCa < 1:10616686‑M2/16‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:14662407/68‑1 (MQ=255) cggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAAc < 1:31469692‑M1/64‑1 (MQ=255) aCGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAAc > 1:24987261/1‑68 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:38481945‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:31564400‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatatctaccgccagtACCGACGATATCAGCAAACa < 1:22558968‑M2/20‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:23328666/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:23203600/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:20882293/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:4179177/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:26698201/68‑1 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGCCGATATCAGCAAACAg > 1:35054880/1‑68 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGa > 1:36728075‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:13061969‑M1/68‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATaa < 1:30812131‑M1/67‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt > 1:2374222‑M1/1‑68 (MQ=255) GCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt < 1:15682346‑M1/67‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:24652419‑M1/68‑1 (MQ=255) GGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCg < 1:39476672‑M1/68‑1 (MQ=255) tgccggcagcaacagtatcaatattacaaccgccagtACCGACGATATCAGCAAACAGATAATCCgg < 1:16945000‑M2/30‑1 (MQ=255) TAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCgg > 1:1765028‑M1/1‑67 (MQ=255) aGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc < 1:10297692/68‑1 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:29619103/1‑67 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:5565677/1‑67 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgcg < 1:33489832/66‑1 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg > 1:4995831/1‑68 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg < 1:37913001/68‑1 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:28812494/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:890164/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:25319455/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:20238872/1‑68 (MQ=255) atTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGa < 1:21014092/68‑1 (MQ=255) tGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAAc > 1:36463919/1‑68 (MQ=255) tGATACTGTTGCTGCCGTCACCGCCAGGACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAAc > 1:16806327/1‑68 (MQ=255) gATACTGTTGCTGCCGTCAC‑‑CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:36182764/68‑1 (MQ=255) tccTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:8681923/66‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:11305417/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:37233433/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:17154433/68‑1 (MQ=255) aCTGTTGCTGCCGTCCCCGCCAGTACCGACGATTTCAGCAAACAGATAAACCGGCCGCGGGAACGgc > 1:9322337/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:21859936/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:3566/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:19417576/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:4758414/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:32836452/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:2230111/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:5801311/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:6452493/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:7890874/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:28457616/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:25801167/1‑67 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:12723986/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:964035/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:26194580/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:24587173/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:2046222/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCg > 1:6909759/1‑68 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCg > 1:33804740/1‑68 (MQ=255) gctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGt < 1:27253901/68‑1 (MQ=255) gctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGt < 1:37747856/68‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:18931347/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:30300132/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:5464950/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:38870134/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:14590928/67‑1 (MQ=255) tgcCGTCAACGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:33382721/67‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:35250130/68‑1 (MQ=255) ccGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt > 1:5272670/1‑67 (MQ=255) tCACCGCCAGTACCGACGATAT‑AGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGt > 1:23403912/1‑68 (MQ=255) gccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcg < 1:39303735‑M2/62‑1 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:11751725‑M2/6‑68 (MQ=255) agtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCgg > 1:34202812‑M2/4‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:14484373‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:2927686‑M2/2‑68 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGTCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:18349785/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCgg < 1:13923201/65‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:35427703/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:10801090/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:17519690/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:6074865/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:34509887/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:29740258/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:15189483/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:27839361/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:35848640/66‑1 (MQ=255) | ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTTG > CP009273/1314742‑1314875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |