| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1940291 | 227 (0.480) | 20 (0.050) | 10/96 | NT | 6.4% | intergenic (‑58/+81) | ruvA/yobI | component of RuvABC resolvasome, regulatory subunit/uncharacterized protein |
| ? | CP009273 | = 1940293 | 390 (0.960) | intergenic (‑60/+79) | ruvA/yobI | component of RuvABC resolvasome, regulatory subunit/uncharacterized protein | |||||
Only 100 of 511 total aligned reads displayed.
CCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAA > CP009273/1940226‑1940358 | ccTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGgataga > 1:5380006/1‑68 (MQ=255) cTATCACATGACGCTGCTGCGTAATGAATCAAAGATAATGGTGTATGATATAAAAATGCTGgataga < 1:6281302/67‑1 (MQ=255) cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGgataga < 1:32113845/67‑1 (MQ=255) cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGgataga < 1:23992819/67‑1 (MQ=255) aTCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtat > 1:35150964‑M2/1‑65 (MQ=255) acaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtatcca < 1:32459418‑M2/68‑7 (MQ=255) caTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtatccag > 1:17358485‑M2/1‑61 (MQ=255) aCGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGaa > 1:38522495/1‑68 (MQ=255) cGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAg > 1:18018614/1‑68 (MQ=255) cGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAg > 1:8566792/1‑68 (MQ=255) cGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAg > 1:31235080/1‑68 (MQ=255) gCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAgg < 1:1921032/68‑1 (MQ=255) gCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAgg > 1:832721/1‑68 (MQ=255) gCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAgg < 1:21465473/68‑1 (MQ=255) cTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGa > 1:29446001/1‑68 (MQ=255) cTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGa > 1:3929217/1‑68 (MQ=255) tCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGa < 1:14974939/67‑1 (MQ=255) tGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATgaa > 1:27068891/1‑68 (MQ=255) aaTGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGaaa > 1:6491950/1‑67 (MQ=255) tGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACt < 1:1588256/68‑1 (MQ=255) tGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACt < 1:30057352/68‑1 (MQ=255) tGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACt < 1:4341887/68‑1 (MQ=255) gAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACtt > 1:16942472/1‑68 (MQ=255) gAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACtt > 1:12682358/1‑68 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:15232219/68‑1 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:29832021/68‑1 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:24446164/68‑1 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:2071255/68‑1 (MQ=255) aTAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtg > 1:21025736/1‑67 (MQ=255) aTAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtg > 1:34281789/1‑67 (MQ=255) aTAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtg > 1:10670463/1‑67 (MQ=255) aTAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtg > 1:26747454/1‑67 (MQ=255) tAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtgt < 1:32822619/67‑1 (MQ=255) tAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtgt < 1:37418776/67‑1 (MQ=255) tAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtgt < 1:11656238/67‑1 (MQ=255) aTGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGtctc < 1:36216030/68‑1 (MQ=255) aTGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGtctc < 1:16484739/68‑1 (MQ=255) aTGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGtctc < 1:38325479/68‑1 (MQ=255) gCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGa > 1:10862350/1‑68 (MQ=255) gCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGa > 1:24879124/1‑68 (MQ=255) gCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGa > 1:36815885/1‑68 (MQ=255) gTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa < 1:11334386/68‑1 (MQ=255) gTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa < 1:25243864/68‑1 (MQ=255) gTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa < 1:28975785/68‑1 (MQ=255) gTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa < 1:2739075/68‑1 (MQ=255) aTGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa > 1:7858122/1‑66 (MQ=255) tGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACt < 1:20125698/68‑1 (MQ=255) gATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTg < 1:19959225/68‑1 (MQ=255) aaaaaaaTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGaaa > 1:33783764/1‑68 (MQ=255) aaaaaaTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGaaaa < 1:14725532/68‑1 (MQ=255) aTGCTGGATAGATATCCAGCGAAGTATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGc < 1:35691676/68‑1 (MQ=255) aTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGc < 1:3320404/68‑1 (MQ=255) aTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGc < 1:13362468/68‑1 (MQ=255) aTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGc < 1:12323728/68‑1 (MQ=255) tGCTGGATAGAtatccagcatttttttatcatacagcattatctttgattcattacgcaggagcgtca > 1:13522467‑M2/1‑11 (MQ=255) cTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGAt > 1:34515829/1‑50 (MQ=255) tGGATTTAtatggagcatttttttatcatacagtattatctttgattcattacgcaggagcgtcatgt > 1:13885264‑M2/1‑8 (MQ=255) tGGATAGAtagccagcatttttttatcatacagcattatctttgattcattacgcaggagcgtcatgt > 1:17704859‑M2/1‑8 (MQ=255) tGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGATGTGTCTCGATGAACTGAAAAATGGcaca < 1:37207175/67‑1 (MQ=255) tGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAg < 1:18339821/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATTAACTGAAAAATGGCACAGt < 1:19034800/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:36487386/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:5849949/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:37838110/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:39095496/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:4581747/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:4889090/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:5220008/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:28617633/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:720424/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:7653159/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:8115663/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:9223523/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:9441013/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:26063515/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:10269754/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:14090200/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:14279140/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:15686790/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:16070184/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:16326221/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:21790958/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:22049105/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:22625175/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:23090423/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:23574276/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:25627216/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:3603660/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:27983328/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:10023284/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:29094553/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:29577654/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:30868566/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:31783255/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:32619596/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:3408178/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:34922711/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:35524378/68‑1 (MQ=255) gatagataTCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:27628262/67‑1 (MQ=255) agataTCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATaa < 1:2632617/68‑1 (MQ=255) | CCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAA > CP009273/1940226‑1940358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |