| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3613390 = | NA (NA) | 4 (0.010) | 4/90 | NT | 100% | coding (839/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | 3613665 = | 0 (0.000) | coding (1114/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
CCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGG > CP009273/3613598‑3613731 | tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:5560413‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:38940317‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:37003653‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:32469487‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:16364356‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:31306605‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:28843269‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:17322757‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:26316431‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:24327109‑M2/68‑68 (MQ=255)tattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta > 1:21382632‑M2/68‑68 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa < 1:10650590‑M2/2‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa < 1:5659547‑M2/2‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa < 1:33811616‑M2/2‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa < 1:25418626‑M2/2‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:1295172‑M2/1‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:23475022‑M2/1‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:34823054‑M2/1‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:30537225‑M2/1‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:32999673‑M2/1‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:38159567‑M2/1‑1 (MQ=255) attccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:11996318‑M2/1‑1 (MQ=255) attccgggtcgtgcggcagccacacggcagacagacggatgccgttgtcccggccatattcggtgta < 1:6330183‑M2/1‑1 (MQ=255) attccggggcgggcgtcagccacacggcagacagacggatgccggtgtcccggccatattcggtgtaa < 1:18748747‑M2/2‑1 (MQ=255) ttccgggtcgtgcgtcagccacacggcagacagccggatgccgttgtcccggccatattcggtgtaa > 1:23818615‑M2/66‑67 (MQ=255) ttccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa > 1:6529979‑M2/66‑67 (MQ=255) ttccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa > 1:10090588‑M2/66‑67 (MQ=255) ttccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa > 1:30499329‑M2/66‑67 (MQ=255) ttccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaa > 1:29622014‑M2/66‑67 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:32693458‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:13801867‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:20538934‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:34230628‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:35136973‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:11194828‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:4236856‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:4477408‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:4563591‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:7312843‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:16930817‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:19487708‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:22025128‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:17670393‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:25431816‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:25987011‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:17496640‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:27348774‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:29497332‑M2/58‑68 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:31426634‑M2/11‑1 (MQ=255) cgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggggtAACCCGGCAgg < 1:18762472‑M2/11‑1 (MQ=255) cgtgcggcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg > 1:28539607‑M2/58‑68 (MQ=255) cgtgcggcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:7373100‑M2/11‑1 (MQ=255) gggcggcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:10847809‑M2/11‑1 (MQ=255) gggcgccagccagacggcagacagacggatgccgttgtcccggccataatcggggtAACCCGGCAgg < 1:25145468‑M2/11‑1 (MQ=255) gcgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtAACCCGGCAgg < 1:172010‑M2/11‑1 (MQ=255) acagacggatgccgttgtcccggccatattcggtgta < 1:33021335‑M2/1‑1 (MQ=255) acagacggatgccgttgtcccggccatattcggtgtAACCCGGCAGGCTTAAGCTACACGTATCAGTa > 1:5405544‑M2/37‑68 (MQ=255) gacggatgccgttgtcccggccatattcggtgtAACCCGGCAGGCTTAAGCTACACGTATCAGTATga > 1:32848921‑M2/34‑68 (MQ=255) ccatattcggtgtAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGcatcaccatc > 1:30328960‑M2/14‑67 (MQ=255) tcggtgtAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACa > 1:35693998‑M2/8‑68 (MQ=255) tAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTgg > 1:38060979‑M2/2‑68 (MQ=255) AACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCCTCACAGACAGCCTgg > 1:28520891‑M2/1‑67 (MQ=255) AACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTgg > 1:27555877‑M2/1‑67 (MQ=255) | CCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGG > CP009273/3613598‑3613731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |