| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3615349 = | NA (NA) | 10 (0.020) | 8/96 | NT | 100% | coding (2798/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | 3615372 = | 0 (0.000) | coding (2821/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
Only 100 of 323 total aligned reads displayed.
CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCG > CP009273/3615305‑3615439 | ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaatgatagtgcgc > 1:1465633‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:10208104‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:30020781‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:28688003‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:31776189‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:23321180‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:2155447‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:19410564‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:53130‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:15148147‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:8032434‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgaaggtcataccgcaaaagctagggcgc > 1:31463655‑M2/68‑68 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:32515858‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:39086307‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:4726478‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:17500169‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:2610913‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:16542668‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:34219041‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:3078109‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:12259653‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:8475135‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttcgctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:14104501‑M2/2‑1 (MQ=255) ttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGt < 1:9361160‑M2/3‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGt > 1:20057482‑M2/65‑67 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:32776010‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:24608404‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:38132919‑M2/65‑68 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:27614253‑M2/65‑68 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:11642026‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:3999704‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:4135003‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:28355095‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:10581027‑M2/65‑68 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:30585051‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:12977996‑M2/4‑1 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:21152087‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:11222571‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:9171474‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:36409552‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:6234491‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggaaaagatagtgcgCGTc > 1:34925201‑M2/64‑67 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:7581758‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:29003545‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:31992297‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:12216258‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:68134‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:7305880‑M2/63‑68 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg < 1:34663734‑M2/7‑1 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg < 1:26309232‑M2/7‑1 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg < 1:17854741‑M2/7‑1 (MQ=255) gggatgagggcggatttctctgtcagcctgccgtgacggtcaaaccggtaaagatagtgcgCGTCACg < 1:20433451‑M2/7‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:35838920‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:35922138‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:38286227‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:30951145‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:509917‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:27381098‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:16190891‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:23940801‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:29688825‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:22659784‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:22143982‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:24816575‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:1853381‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:1731745‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:15241438‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:13858540‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:13472500‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:12610969‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtaataccggtaaagatagtgcgCGTCAcgt > 1:25366972‑M2/60‑66 (MQ=255) tgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACGGCa < 1:26963519‑M2/10‑1 (MQ=255) tcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGGCACGGCAGGCTg < 1:25251694‑M2/15‑1 (MQ=255) ttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGCCACGGCAGGCTGACag < 1:25747306‑M2/19‑1 (MQ=255) tgctctgtcagcctgccgtgacggtcaaaccggtaaagatagtgcgCGGCACGGCAGGCTGACagag < 1:25675684‑M2/21‑1 (MQ=255) ggtcataccggtaaagatagtgcgCGTCACGGCAGGCTGCCAGAGAAAACCGACCTCATCCCGGAAgg < 1:10026145‑M2/44‑1 (MQ=255) accggtaaagatagtgcgCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTa > 1:19120579‑M2/19‑67 (MQ=255) cgCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGAtgatga > 1:33542097‑M2/3‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGCCCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:10817418‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGCCCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:29543770‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAgcc > 1:37766217‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:9657329‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:25887494‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:5634642‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:33644912‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:11899658‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:25973297‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:330055‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:7537389‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg < 1:15802647‑M2/68‑1 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:37046983‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:33848332‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:35637496‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:24916008‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:4321247‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:19806053‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:20814476‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:24203868‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGGTATCCGCACGGATGATGAGCg > 1:26564854‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTAATCCCGGAAGGTGTTATCCGCACGGATGATGAGCg > 1:33175712‑M2/1‑68 (MQ=255) | CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCG > CP009273/3615305‑3615439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |