| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4542649 | 348 (0.830) | 14 (0.040) | 3/98 | NT | 3.6% | intergenic (+12/‑69) | uxuA/uxuB | mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent |
| ? | CP009273 | = 4542662 | 454 (1.240) | intergenic (+25/‑56) | uxuA/uxuB | mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 117 total aligned reads displayed.
AAGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4542576‑4542649‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggcaCGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC < CP009273/4542662‑4542596 AAGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCA < 1:31957222/68‑1AAGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCA < 1:23629054/68‑1AAGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCA < 1:1768502/68‑1 AGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCAC < 1:6561558/68‑1 ggtCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:13613927/4‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGCTCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:10737647/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:27308822/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:17283581/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:17321803/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:31396919/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:30526524/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:194336/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:30291089/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:28898490/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:8559510/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:21381002/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:23888624/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:2366727/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:232960/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:23050012/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:23149842/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:3813132/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:6207533/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:5982003/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:5238514/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:718470/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:4487321/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:34203694/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:33725355/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:15409611/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:32827563/1‑68 GGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC > 1:10635352/1‑68 GGCCTGCCCGTAGTTCGGGGTGTCTAACTGGGGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACC < 1:11571813/68‑1 GCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG > 1:34068745/1‑68 GCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG > 1:14181723/1‑68 GCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG > 1:13996540/1‑68 GCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG > 1:12857675/1‑68 GCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG > 1:15881169/1‑68 GCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG > 1:16042052/1‑68 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:10484713/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:23799784/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:26108284/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:29110487/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:32785914/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:32822511/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:16087180/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:21966371/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:21917232/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:21427806/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:17110643/67‑1 CCTGGCCGAAGTTCGCGGTGTCGAACTGCCGATCAAGCGCGCTTTCTTTAGCAGTTAATATCCACag > 1:14652285/1‑65 CCTGGCCGAAGTTCGCGGTGGCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:6758952/67‑1 CCTGGCCGAAGTGCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCG < 1:725512/67‑1 ctcGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGC > 1:27235054/4‑68 CTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATCTCCACCGGC > 1:19691197/1‑68 CTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGC < 1:12374755/68‑1 CTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGC < 1:14408309/68‑1 CTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGC < 1:8788474/68‑1 CTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGC > 1:20132607/1‑68 CTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGC > 1:14962468/1‑68 CGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGCACGGC < 1:5354296/68‑1 TGGCGATCCAGCGCGCTTTCTTTAGCCGTTTATATACACCGGCCCGGCGCGCAGCCCTGGCGGGGGgt > 1:28442674/1‑66 TTAGCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:17480572/1‑68 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTATCGGCTAAAGAAAGCGC > 1:23170167/1‑65 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:15355630/1‑65 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:1458774/1‑65 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:6088014/1‑65 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:22878558/1‑65 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:30159316/1‑65 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:25352996/1‑65 GCCGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGC > 1:26099543/1‑65 CGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGG > 1:26785843/1‑68 CGTTAATATCCACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGG > 1:12862302/1‑68 ACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTC > 1:6706961/1‑68 ACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTC > 1:12842263/1‑68 ACCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTC > 1:32890293/1‑68 CCGGCACGGCGCGCCGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTC > 1:33055433/1‑67 CCGGCACGGCGCGCAGCCATGCCGGTGGATATTACCGGCTAAAGAAAGCGCGCTGGATCGCCAGTTC > 1:2210700/1‑67 CCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCG > 1:1655412/1‑68 CCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCG > 1:19217847/1‑68 CCGGCACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTC > 1:34350958/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:28941984/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:29164478/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:8029293/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:32046876/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:3277972/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:5636019/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:15685278/1‑67 CACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACA > 1:3678420/1‑67 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACg > 1:12258053/1‑67 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC > 1:32999069/1‑68 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC > 1:21306863/1‑68 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC > 1:2086758/1‑68 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC < 1:32639503/68‑1 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC > 1:27528768/1‑68 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC > 1:10665168/1‑68 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC < 1:24783249/68‑1 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC > 1:10180955/1‑68 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACAC < 1:19777142/67‑1 ACGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGA > 1:29280079/1‑40 AAGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAATATCCACCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4542576‑4542649‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggcaCGGCGCGCAGCCATGCCGGTGGATATTAACGGCTAAAGAAAGCGCGCTGGATCGCCAGTTCGACACC < CP009273/4542662‑4542596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |