BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 725724	NA (NA)	20 (0.060)	9/94	NT	NA	coding (686/4194 nt)	rhsC	Rhs family putative polymorphic toxin
*	?	CP009273	= 725738	NA (NA)	20 (0.060)	9/94	NT	NA	coding (700/4194 nt)	rhsC	Rhs family putative polymorphic toxin

Only 100 of 328 total aligned reads displayed.

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/725649‑725724

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggtgaTTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACCAG  <  CP009273/725738‑725672

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                             <  1:31784199/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                             <  1:20041312/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                             <  1:2247391/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                             <  1:14999659/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                             <  1:27293343/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                             <  1:27788671/68‑1

  CCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCG                                                                            >  1:32971889/1‑67

  CCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCG                                                                            >  1:32177057/1‑67

  CCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCG                                                                            >  1:22911838/1‑67

   CGTACGGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                          <  1:33321169/68‑1

   CGTACCGGGTACTGCCCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGGTCCACCGCGAAGCCGCC                                                                          <  1:13804088/68‑1

   CGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                          <  1:29859430/68‑1

   CGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                          <  1:22238080/68‑1

     TACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        >  1:19733386/1‑68

     TACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        >  1:1722858/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGc                                                                        <  1:24458368/67‑2

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGT                                                                       >  1:20871620/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGT                                                                       >  1:5645469/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGT                                                                       >  1:28130777/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        <  1:8416499/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        <  1:179783/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        <  1:30524305/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        <  1:636848/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        <  1:6566896/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        <  1:23827364/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                        <  1:4115254/67‑1

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                     <  1:33537282/68‑1

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                     <  1:3422907/68‑1

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                     >  1:26811239/1‑68

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                     >  1:18665945/1‑68

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                     >  1:15880502/1‑68

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGGTCCACCGCGAAGCCGCCGGTGA                                                                     <  1:15228434/68‑1

             ACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGATTTCa                                                                >  1:16509975/1‑67

                                                   CGTTCCACCGCGAAGCCGCCGGGGGTTTCGCCGCTGAATTCACCGGCGGCTTCGCGGGGGAACG                              >  1:16998259/1‑64

                                                        CACCGCGAAGCCGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGC                     >  1:379808/1‑68

                                                           CGCGAAGCCGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGGACGTCTGTGTGCGC                   >  1:22046655/1‑67

                                                                   CGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGATCGTCTGTGTGCGCCCGAAGCGG          >  1:27400897/1‑68

                                                                   CGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG          >  1:12874732/1‑68

                                                                   CGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG          >  1:24707856/1‑68

                                                                    gctGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG          >  1:21656318/4‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGACCGTCTGTGTGCGCCCGAAGCGG          >  1:29691014/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:30119617/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:12380816/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:7772268/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:28575262/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:34855213/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:8330249/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:1008633/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:26426550/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:34679029/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:11232313/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:11011611/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:9170030/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:32702091/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:33058939/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:19541921/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:20205034/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:21185897/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:16797221/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:22636965/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:23557560/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:4551992/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:24566712/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:25462071/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:7113465/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT         <  1:1299022/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG          >  1:14172926/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG          >  1:31598731/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG          >  1:20724431/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG          >  1:10361155/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCG‑CCGAAGCGGT         >  1:25863909/1‑67

                                                                      CGGTGATTTCGCCGCTGAATTCCCCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:34586403/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:6776043/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       >  1:8891131/1‑68

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:5826805/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:33678374/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:6181017/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:9570914/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:1817698/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:10240266/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:10714841/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:1141829/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:12006700/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:12224165/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:13748216/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:15509490/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:15675520/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:16056587/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:25810090/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:28810207/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:29568180/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:30771267/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:31527785/68‑1

                                                                      CGGTGATTGCGCCGCTGAATTCACCGGCGGCTTCGCGGGGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:2173922/68‑1

                                                                      CGGTGATGTCGCCGCAGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       <  1:23978069/68‑1

                                                                       GGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCA      <  1:4879773/68‑1

                                                                       GGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC       >  1:11762593/1‑67

                                                                       GGTGATATCGCCGCTGAATTCACCGGCGGCTTCGCGGTCGAACGTCTGTGTGCGCCCGAAGCGGTCC       >  1:31180200/1‑67

                                                                          GATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACCA   >  1:23472862/1‑68

                                                                           ATTTCGCCGGTGATTTCACCGGCGGCTTCGCGGTGGAACGGCTGGGTGCGCCCGAAGCGGTCCACCAG  <  1:32465063/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/725649‑725724

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggtgaTTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACCAG  <  CP009273/725738‑725672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.