| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 262 (0.630) | 20 (0.060) | 7/94 | NT | 9.3% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 171 (0.490) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
CGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314836‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 CGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACC < 1:34422015/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:33595173/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:30228036/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:26917617/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:25317033/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:24119685/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:32994967/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:18824079/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:13053503/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:9697319/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:12609148/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGGGACGGCAGCAACAGTATCAATATTTCTACCG < 1:33045639/68‑1 cTTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:7442041/66‑1 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:29067570/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:5866047/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:2496337/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:14245851/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:8730233/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:14420216/67‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCA < 1:23836757/68‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:15044543/67‑1 TATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG > 1:27189876/1‑68 ATCTGTTTGGTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:31969944/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:23615133/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:14238875/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:31985088/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:2533455/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:6343348/68‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:28850423/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:32324886/67‑1 TGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:26070027/68‑1 TGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATA < 1:6271911/68‑1 ATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAG < 1:34745617/68‑1 ggcACTGGCGGCCACGGCAGCAACAGTATCAATATTTCTCCCGCCAGAACCGACGATATCAGCAAACA < 1:14969498/65‑1 ggaACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:19273876/65‑1 ggaACTGGCGGTCACGCCAGCAACAGTATCAATATTACAACCGCCAGTACCGACGATATGAGCAAACA < 1:16513871/65‑1 cgcACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:11806956/65‑1 cgcACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:6056265/65‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:2228229/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:24149449/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:10534383/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:5820875/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTAGCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:11809906/68‑1 GGTACTGGCGGTGACGACAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:25092774/68‑1 TACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAG < 1:10344055/67‑1 cCTGGCGGCGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGA < 1:25938977/66‑1 ACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGA < 1:7256187/67‑1 ACTGGCGGTGACGGCAGCAACAGTATCAATAATTCTACCGCCAGTACCGACGATATCAGCAAACAGA < 1:10266846/67‑1 ACTGGCGGGGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGA < 1:10103695/67‑1 CGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAATCC > 1:5688682/1‑68 TCTACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCA > 1:13382494/1‑68 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAG < 1:26966363/68‑1 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAG < 1:32625306/68‑1 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTA > 1:29883370/1‑67 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC > 1:9951087/1‑67 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:15951997/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:7522160/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:27904965/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:14984675/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:15589222/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:27176863/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:4586171/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:4347134/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:16093315/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:16706359/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:16745357/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:19663260/1‑68 CAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCG < 1:7768196/68‑1 AGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGG > 1:12203883/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGCACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:9598696/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:30629831/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:3111839/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:32669099/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:1520474/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:15433273/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:6006734/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:15872934/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:16967344/1‑68 CGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314836‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |