BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2787742 =	471 (1.130)	51 (0.140)	11/96	NT	12.5%	coding (131/1401 nt)	gabP	gamma‑aminobutyrate transporter
*	?	CP009273	2787778 =	310 (0.870)	51 (0.140)	11/96	NT	12.5%	coding (167/1401 nt)	gabP	gamma‑aminobutyrate transporter

Only 100 of 119 total aligned reads displayed.

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2787815‑2787742

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgggcTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGTT  >  CP009273/2787778‑2787844

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:9059927/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:23672518/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:23764729/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:20680487/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:26715301/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:31732892/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:3727063/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG                                                                           <  1:14197486/68‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC                                                                            <  1:33683751/67‑1

  TTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCC                                                                         <  1:32910968/68‑1

   TTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCG                                                                        >  1:17829240/1‑68

    TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG                                                                       <  1:6590883/68‑1

    TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG                                                                       <  1:18226784/68‑1

    TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG                                                                       <  1:12104476/68‑1

    TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG                                                                       <  1:22446348/68‑1

     CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG                                                                      <  1:1631518/68‑1

     CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG                                                                      <  1:25054500/68‑1

     CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG                                                                      <  1:11331539/68‑1

     CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG                                                                      <  1:22203098/68‑1

     CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG                                                                      <  1:33753660/68‑1

     CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG                                                                      <  1:14395833/68‑1

     CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG                                                                      <  1:23289691/68‑1

      CGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC                                                                     <  1:6797047/68‑1

      CGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC                                                                     <  1:6188191/68‑1

       GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT                                                                    <  1:34029127/68‑1

       GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT                                                                    <  1:34180638/68‑1

       GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT                                                                    <  1:32787627/68‑1

       GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT                                                                    <  1:8736435/68‑1

         CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTAC                                                                  <  1:3604261/68‑1

         CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA                                                                   <  1:11088704/67‑1

             ATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGT                                                              <  1:18573286/68‑1

              TCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTG                                                             <  1:32234703/68‑1

              TCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTG                                                             <  1:28291137/68‑1

               CCGCATAATCTTAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:12563335/68‑1

               CCGCATAATCATACCCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:25254973/68‑1

               CCGCATAATCATAACCACCCGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:12990055/68‑1

               CCGCATAATCATAACCACCAGTGGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:25585063/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATCCCGCCGGGCTACTGGTGG                                                            <  1:33281482/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:26416439/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:28331921/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:24572803/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:3893531/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:24255841/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:8927848/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:10222357/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:13647474/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:17965099/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:17730546/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:17595383/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:19784564/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:20023802/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:15706010/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:20230287/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:21159726/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:11484647/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:11106579/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:23265432/68‑1

               CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:2342691/68‑1

               CCGCATAATCATAACCACCAGAAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:20899973/68‑1

               CCGCACACTCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG                                                            <  1:23749421/68‑1

                CGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATCCCGCCGGGCTACTGGTGG                                                            <  1:22436632/67‑1

                CGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGT                                                           <  1:24713006/68‑1

                    TAATCATACCCACCAGTAGCCCGGCGAACACATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATG                                                       <  1:23961188/68‑1

                    TAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATG                                                       <  1:9384553/68‑1

                    TAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATG                                                       <  1:17019016/68‑1

                    TAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATG                                                       <  1:28009362/68‑1

                      ATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCTGGCTACTGGTGGTTATGAT                                                     <  1:1527296/68‑1

                      ATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGAT                                                     <  1:28135003/68‑1

                         ATAACCACCAGTAGCCCGGCGAACAGATCGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTAT                                                  <  1:1866457/68‑1

                         ATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTAT                                                  <  1:15583763/68‑1

                         ATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTAT                                                  <  1:2630715/68‑1

                              CACCAGTAGCCCGCCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTCATGATTATGCGGA                                             <  1:25165471/68‑1

                                        CCGGCGAACAGATCGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGA                                   <  1:6533624/68‑1

                                        CCGGCCAACAGATAGCCCAGAAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGA                                   <  1:14956268/68‑1

                                         CGGCGAACAGATCGCCCAGAAAACCCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAA                                  <  1:26498979/68‑1

                                                                   GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG        <  1:7135334/68‑1

                                                                   GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG        <  1:30263207/68‑1

                                                                   GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG        <  1:5624108/68‑1

                                                                   GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG        >  1:14610288/1‑68

                                                                    CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT       >  1:29772583/1‑68

                                                                     CGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTT      <  1:7745092/68‑1

                                                                     CGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT       <  1:30408170/67‑1

                                                                     CGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT       <  1:12526056/67‑1

                                                                      GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC     >  1:28143188/1‑68

                                                                      GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC     >  1:32321468/1‑68

                                                                      GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC     >  1:27649411/1‑68

                                                                      GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC     >  1:19727470/1‑68

                                                                        GCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   >  1:25005862/1‑68

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGTAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:24172488/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGTT  <  1:24669604/68‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:15748360/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:3329811/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:17460657/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:14256650/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:5074361/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:32843309/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:2741914/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:31310644/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:10347700/67‑1

                                                                         CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT   <  1:10027768/67‑1

CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2787815‑2787742

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgggcTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGTT  >  CP009273/2787778‑2787844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.