| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4506708 = | 360 (0.860) | 16 (0.050) | 10/94 | NT | 5.4% | coding (827/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator |
| ? | CP009273 | 4506742 = | 263 (0.750) | coding (793/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator | |||||
Only 100 of 473 total aligned reads displayed.
TTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506641‑4506774 | gaaggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCa < 1:13444684‑M1/3‑1 (MQ=255) cgcgATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:4993541/1‑67 (MQ=255) aggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAc > 1:27384925‑M1/64‑68 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacgcgttaccGCAAcg < 1:29154605‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:32388298‑M1/6‑1 (MQ=255) gacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:31823038‑M1/6‑1 (MQ=255) gATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcg < 1:26804074/67‑1 (MQ=255) gATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcg < 1:5338960/67‑1 (MQ=255) gATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcg < 1:15420749/67‑1 (MQ=255) acatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcggc < 1:8429651‑M1/8‑1 (MQ=255) aTAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCa > 1:2337091/1‑63 (MQ=255) aCGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCggg < 1:33533392/68‑1 (MQ=255) gTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGa > 1:11646290/1‑67 (MQ=255) ctgagcttcagcgataaaccgctgggtgaggtgatagccccgctaacccgttaccGCCACGGcgggc < 1:425043‑M1/12‑2 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc < 1:34219977/67‑1 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:5679967/1‑67 (MQ=255) aGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca > 1:25639273/1‑68 (MQ=255) ggATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca > 1:34125881/1‑67 (MQ=255) ggATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca > 1:31222964/1‑67 (MQ=255) cttcagcgataaaccgctgggtgcggtgatagccacgctaacccgttaccGCAACGGCGGGAtcgcc < 1:16786594‑M1/17‑2 (MQ=255) gATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:21823799/1‑68 (MQ=255) gATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:24292357/1‑68 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc < 1:14527047/67‑1 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:2386425/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:2602867/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:22348128/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:19842271/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:28574853/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:17043529/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:12458653/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:32742337/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:14758055/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:34725850/1‑67 (MQ=255) tCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgc < 1:7173441/68‑1 (MQ=255) cGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgca < 1:26445937/68‑1 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc < 1:1064037/67‑1 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc > 1:29263408/1‑67 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc > 1:30893136/1‑67 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc > 1:25434243/1‑67 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc > 1:15942593/1‑67 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc < 1:1022784/67‑1 (MQ=255) tCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCAc < 1:33876327/68‑1 (MQ=255) tCGGTATTTTTCAGCGGGAACGGCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCAc < 1:20796214/68‑1 (MQ=255) cGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACg < 1:17854372/68‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:23274769/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:14256285/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:385783/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:30419585/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:19139495/67‑1 (MQ=255) aTTTTTCAGCGTGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGt < 1:28423247/68‑1 (MQ=255) aTTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGt < 1:16591338/68‑1 (MQ=255) aTTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGt > 1:21347755/1‑68 (MQ=255) tttttCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGtt < 1:7858227/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGGACGCCGTTGCgg > 1:24962094/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:27990777/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:8914287/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:23122316/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:28950441/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:28428985/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:27730072/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:1832179/68‑1 (MQ=255) cAGCGGGAACGTCCCGCTCAGGCGCCGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGccgg < 1:26149330/68‑4 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:18090641/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:23583930/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:20524447/67‑1 (MQ=255) aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGATCGCAGCGCAGCACGCCGTTGCGGTAACggg < 1:30094122/67‑1 (MQ=255) aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACggg < 1:858276/67‑1 (MQ=255) aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACggg < 1:24478874/67‑1 (MQ=255) aaCGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACggg < 1:667029/67‑1 (MQ=255) cGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTa > 1:6054579/1‑68 (MQ=255) gTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAg < 1:9342397/68‑1 (MQ=255) gccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCg < 1:8216530‑M1/49‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:11723981/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:15078247/67‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGc < 1:15648223/67‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:1499846/68‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:17102527/68‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:25120672/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:31580559/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:10866393/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:27147137/67‑1 (MQ=255) ctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCCCGCCGTTGCGGTAACGGGTTAGCGTGGCTa < 1:3731615‑M1/55‑1 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:18752080/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:17451575/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtc < 1:16131628/66‑1 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtc < 1:13767212/66‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACTCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:22204302/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:13053339/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:29609386/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:17297084/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:33176567/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:22643008/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:21056345/1‑66 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:9668363/1‑66 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGGTAGCGTGGCTAtcacc < 1:6367064/68‑1 (MQ=255) ttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctc < 1:4471661‑M1/62‑1 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:2554282/67‑1 (MQ=255) accGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:12084768‑M1/64‑1 (MQ=255) ccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCGATCACCTCAccc < 1:3596147‑M1/66‑1 (MQ=255) GCAACGGCGGGATCGCAGCGCAGCCCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCa < 1:6189639‑M1/67‑1 (MQ=255) | TTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506641‑4506774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |