| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 248303 | 151 (0.360) | 11 (0.030) | 6/96 | NT | 5.6% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | = 248351 | 240 (0.670) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 449 total aligned reads displayed.
TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGT > CP009273/248236‑248370 | tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:29837344‑M1/8‑1 (MQ=255)tCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:14040638‑M1/68‑1 (MQ=255) gtttccatttgctggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc > 1:13232288‑M1/60‑67 (MQ=255) ccAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa > 1:2927643/1‑68 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:25079546/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:17536330/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:27111515/67‑1 (MQ=255) aGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAAt > 1:11586269/1‑68 (MQ=255) aGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAAt > 1:7488434/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:16980163/1‑68 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGGAAACCACCCTGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:2887961/67‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:3576516/67‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:24297011/1‑67 (MQ=255) tGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGc < 1:19914794/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa < 1:2050689/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa < 1:5488183/67‑1 (MQ=255) aTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa > 1:18649966/1‑66 (MQ=255) aTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATc < 1:3805701/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:21443674/68‑1 (MQ=255) aaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa > 1:7962043/1‑67 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:23578183/1‑68 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:2468375/1‑68 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:8668278/1‑68 (MQ=255) gTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:11016854/1‑67 (MQ=255) gcagccccaccagacgcacaccgcgcccGCCGCGGCGGGATAAAGCTGATCTAATCGCCCCCGCGCGt < 1:15618752‑M1/40‑1 (MQ=255) gcagccccaccagacgcacaccgcgcccGCCGCGGCGGAATGAAGGTGAGCTAATCGCCCccgcgcgg < 1:26947855‑M1/40‑2 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCgttcagcccaggttttacgcgggggggcgattaga > 1:9783890‑M1/1‑32 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:18004596/1‑67 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAATCTGATCTAATCGCCACCGCGCGTaaaa < 1:28193762/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAcc < 1:31095458/68‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAc < 1:22136075/67‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAc < 1:25341907/67‑1 (MQ=255) aaaCCACACAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:16401398/66‑1 (MQ=255) accCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGa < 1:21834332/68‑1 (MQ=255) ccAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATg > 1:6540240/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:12554073/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:1204942/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:18936781/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:17705902/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:17475387/1‑68 (MQ=255) cacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTACTCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:12754110‑M1/56‑1 (MQ=255) cacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAACCCTGGGATGAAc < 1:24022865‑M1/56‑1 (MQ=255) cacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:5217073‑M1/56‑1 (MQ=255) aGCTCGGCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:6192978/66‑1 (MQ=255) aGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcag > 1:20097886‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:1618470/66‑1 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:4143208‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:6791004‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:31951467‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:26132452‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:33180896‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:34094005‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:5336504‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:21015916‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:34684731‑M2/67‑2 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgcc < 1:16778263‑M1/59‑1 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgcc < 1:10026069‑M1/59‑1 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCGGGGATGAAcgcc < 1:4637576‑M1/59‑1 (MQ=255) cgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgccgc > 1:12955780‑M1/8‑68 (MQ=255) aCGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccg > 1:25687312‑M2/1‑63 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:32237235‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:13449557‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcg < 1:14827840‑M2/67‑7 (MQ=255) tCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcgg > 1:10102621‑M1/1‑12 (MQ=255) tCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcgg > 1:29712584‑M1/1‑12 (MQ=255) tCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCTCGCGTAAAACCTGGGATGAACgccgaggc < 1:9571015‑M2/68‑9 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:1021161/68‑1 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:26346653/68‑1 (MQ=255) gCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccaga < 1:4106460‑M1/68‑61 (MQ=255) gCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccaga < 1:9045817‑M1/68‑61 (MQ=255) gCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccaga < 1:7883302‑M1/68‑61 (MQ=255) gCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccaga < 1:20645813‑M1/68‑61 (MQ=255) ccGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagac > 1:2379472‑M1/1‑7 (MQ=255) ccGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagac > 1:27612194‑M1/1‑7 (MQ=255) ccGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccaga > 1:32595879‑M2/1‑55 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:30806342‑M1/67‑1 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:6952005‑M1/67‑1 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:19261224‑M1/67‑1 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:20836822‑M1/67‑1 (MQ=255) cgcgGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacg < 1:27392153‑M1/68‑63 (MQ=255) cgcgGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagac > 1:22422010‑M2/1‑54 (MQ=255) GCGGCGGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGcgcg > 1:2330037‑M1/1‑68 (MQ=255) ggCTGAATAACGCTGAGCTAATCGCCACCGCGCGTAAAACCTGGGAGGAACgccgcggccagacgtgc > 1:14193266‑M2/1‑51 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:30030732‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:15324888‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:4792174‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:21738330‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGAGGAACGCCGCGGCGGGCGCGgt > 1:30455341‑M1/1‑68 (MQ=255) GGCTGAATAAAGCGGATCTAATCGCCACCGCGCGTAAAACCTGGGATGACCGCCGCGGCGGGCGCGgt > 1:13851681‑M1/1‑68 (MQ=255) GCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgtg < 1:33701779‑M1/68‑1 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:19643123‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:31479750‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:25243494‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:25540782‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:30926289‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:10770870‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:32872901‑M1/67‑67 (MQ=255) cTGATTAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:31584157‑M2/1‑49 (MQ=255) CTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgtg > 1:12372483‑M1/1‑67 (MQ=255) CTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:20410593‑M1/1‑66 (MQ=255) | TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGT > CP009273/248236‑248370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |