| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1101408 = | 163 (0.390) | 26 (0.070) | 7/94 | NT | 16.2% | coding (133/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit |
| ? | CP009273 | 1101450 = | 133 (0.380) | coding (175/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit | |||||
Only 100 of 279 total aligned reads displayed.
GCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTAT > CP009273/1101342‑1101475 | gcactacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGcc > 1:27759194‑M1/65‑67 (MQ=255) gcactacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGc < 1:24863662‑M1/2‑1 (MQ=255) gCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGc > 1:19259621/1‑65 (MQ=255) gCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGc > 1:8674295/1‑65 (MQ=255) cTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCct < 1:33624783/67‑1 (MQ=255) actacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:7326848‑M1/5‑1 (MQ=255) actacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:14568489‑M1/5‑1 (MQ=255) actacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:33789290‑M1/5‑1 (MQ=255) actacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:8344571‑M1/5‑1 (MQ=255) actacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:11803026‑M1/5‑1 (MQ=255) actacggctttagcgggaagatcgcctgcaagcgtaataaaggcatgccccggtggggcatcgcccgg < 1:15416856‑M1/6‑3 (MQ=255) tAATCCGGCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGGCCGGCCctgc < 1:29493738/68‑1 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtgataacggcatgccccgtagggcaatcGCCct < 1:16615939‑M1/5‑1 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcgcccg < 1:7571545‑M1/5‑2 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCctgc > 1:28108197‑M1/62‑68 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCctgc > 1:17329868‑M1/62‑68 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:19954497‑M1/5‑1 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:2355286‑M1/5‑1 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:10468324‑M1/5‑1 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:15293286‑M1/5‑1 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:11225508‑M1/5‑1 (MQ=255) ctacggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:30589307‑M1/5‑1 (MQ=255) aaTCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCct > 1:1261367/1‑65 (MQ=255) acggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtggggcaatcGCCct < 1:25562457‑M1/5‑1 (MQ=255) acggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:5763257‑M1/5‑1 (MQ=255) acggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:2790101‑M1/5‑1 (MQ=255) acggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:33841163‑M1/5‑1 (MQ=255) acggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:33410618‑M1/5‑1 (MQ=255) acggctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCct < 1:7393756‑M1/5‑1 (MQ=255) tCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTgg > 1:9311544/1‑68 (MQ=255) tCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTgg > 1:31029785/1‑68 (MQ=255) tCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTgg > 1:21784504/1‑68 (MQ=255) tCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTgg > 1:3127771/1‑68 (MQ=255) gctttagcgggaagatcgcctgcaagcgtaataacggcatgccccgtagggcaatcGCCCGGctgggt < 1:34143384‑M1/12‑3 (MQ=255) aTTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCtt > 1:7771168/1‑68 (MQ=255) ttAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTg > 1:6154751/1‑68 (MQ=255) ttAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTg > 1:13554814/1‑68 (MQ=255) ttAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTg > 1:22694546/1‑68 (MQ=255) tAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGt < 1:24450644/68‑1 (MQ=255) tAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGt < 1:16435139/68‑1 (MQ=255) tAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGt < 1:8091938/68‑1 (MQ=255) aTGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGttt > 1:13651463/1‑68 (MQ=255) tGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTa > 1:10684030/1‑68 (MQ=255) tGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTa > 1:31789798/1‑68 (MQ=255) gggAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaa > 1:29830811/1‑68 (MQ=255) gggAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaa > 1:15677813/1‑68 (MQ=255) gggAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaa > 1:18785503/1‑68 (MQ=255) gggAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaa > 1:24258710/1‑68 (MQ=255) gggAGGCGGCGGCGTCGATGGGGCAATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaa > 1:10801612/1‑68 (MQ=255) ggAGGCGGCGGCGTCGATGGGGCCATTCATCTCGCAGCGGGTCCGGCCATGCTGGATGCTTGTTTaaa > 1:34615252/1‑68 (MQ=255) ggAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaaa > 1:13469356/1‑68 (MQ=255) ggAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaaa > 1:11178610/1‑68 (MQ=255) ggAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTaaa > 1:30732219/1‑68 (MQ=255) gAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCTGCGGGTCCGGCCCTGCTGGATGCTTGTTTaaaa > 1:6114949/1‑68 (MQ=255) ggcggcggcGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAg > 1:13300117/1‑67 (MQ=255) ggcggcggcGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAg > 1:29335665/1‑67 (MQ=255) cggcgTGGATGGTGCCATTCTTCGCGCAGCGGGTCCGGCCCTGGTGGATGGTTGTTTAAAAGTCAgg < 1:12938988/67‑1 (MQ=255) ggcgTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCa > 1:2412245/1‑68 (MQ=255) tGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAgg > 1:30341361/1‑68 (MQ=255) tGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAgg > 1:3988034/1‑68 (MQ=255) tGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAgg > 1:9619280/1‑68 (MQ=255) tGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAgg < 1:26495632/68‑1 (MQ=255) tGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAgg > 1:5296451/1‑68 (MQ=255) tGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAgg > 1:5542256/1‑68 (MQ=255) ggCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAgg < 1:31907286/55‑1 (MQ=255) gCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACACCAGGGCGa > 1:26356452/1‑68 (MQ=255) ttCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc < 1:3750777/68‑1 (MQ=255) ttCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc < 1:23440922/68‑1 (MQ=255) tCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:4907026/1‑67 (MQ=255) cATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:27237809/1‑66 (MQ=255) cATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:33157123/1‑66 (MQ=255) gcgcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCACCAGCAGGGCGATTGCCCTACg > 1:30129781/1‑68 (MQ=255) gcgcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACg > 1:16049861/1‑68 (MQ=255) cccgtagggcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACg < 1:22625668‑M1/54‑1 (MQ=255) gcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACggg > 1:28723299/1‑68 (MQ=255) gcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACggg > 1:26571714/1‑68 (MQ=255) gcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACggg > 1:12830709/1‑68 (MQ=255) gcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACggg < 1:17478632/68‑1 (MQ=255) gcAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACggg > 1:20000334/1‑68 (MQ=255) aGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACgggg < 1:3699361/67‑1 (MQ=255) aGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGc > 1:28439570/1‑68 (MQ=255) gCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCa > 1:9832313/1‑68 (MQ=255) gCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCa > 1:10434144/1‑68 (MQ=255) gggcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCAt < 1:485455‑M1/60‑1 (MQ=255) ggcaatcGCCCTGCTGGATGCTTGTTTAATAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCAt < 1:28835462‑M1/60‑1 (MQ=255) gcaatcGCCCTGGTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:19455642‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGTTGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:6458035‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:17080168‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:13071416‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:32627942‑M1/61‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGcc < 1:4601885/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCg > 1:6533483/1‑68 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCg > 1:18316418/1‑68 (MQ=255) aatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCg < 1:20468371‑M1/64‑1 (MQ=255) ccGGCCCTGCTGGATGCTTGTTTAAAAGTCTTCAAACAGCTGGGCGATTGCCCTACGGGGCATGCCGt < 1:14328518/68‑1 (MQ=255) ccGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGt > 1:18454748/1‑68 (MQ=255) cGGCCCTGCTGGATGCTTGTTTAAAAGGCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGtt < 1:17788327/68‑1 (MQ=255) cGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGtta < 1:6699937‑M1/67‑1 (MQ=255) cGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGtta < 1:21133487‑M1/67‑1 (MQ=255) GCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttat < 1:12433746‑M1/68‑1 (MQ=255) | GCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTAT > CP009273/1101342‑1101475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |