| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 192 (0.460) | 13 (0.040) | 7/90 | NT | 6.6% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 215 (0.640) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 613 total aligned reads displayed.
ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCG > CP009273/2191186‑2191319 | acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC > 1:27323427‑M1/1‑68 (MQ=255)acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC > 1:32062566‑M1/1‑68 (MQ=255)acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGATGC > 1:10007203‑M1/1‑68 (MQ=255) cacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC < 1:9591284‑M1/67‑1 (MQ=255) cacTGCTAATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC < 1:28065074‑M1/67‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:8103246/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:21605123/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:30071348/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:31471043/1‑68 (MQ=255) cTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGtt < 1:29587683/68‑1 (MQ=255) cTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGtt < 1:11127951/68‑1 (MQ=255) gCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTcc < 1:4935829/68‑1 (MQ=255) gCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTcc < 1:24395661/68‑1 (MQ=255) cTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTccc > 1:9369036/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:26031348/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:1941683/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:14724566/68‑1 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7019585‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7527539‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:23610380‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7190387‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:1650186‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:2221422‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17038868‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:16370996‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:13754664‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:28310434‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:1167378‑M2/68‑3 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:24794329‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:12817166‑M2/1‑65 (MQ=255) tgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:10470700‑M2/1‑64 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:13370599‑M2/68‑9 (MQ=255) cGGGCAAACTAAACGCTGTCCCGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:23378518‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatgg > 1:14080478‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatgg > 1:22907034‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:19738588‑M2/1‑58 (MQ=255) aaaCGCTGTCACGATCGGATGACGAACGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcat > 1:18377810‑M2/1‑48 (MQ=255) aCGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACgg > 1:26503116/1‑68 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:9710606/1‑68 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:12494105/1‑68 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCatgtggggacgccgcaatggctttcgtcatgcga > 1:25953458‑M1/1‑34 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:32518475/1‑67 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:34682274/1‑67 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:5227830/1‑67 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTggg < 1:13290440/67‑1 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGAAGGAACTTCTTGGGc > 1:15912167/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTCCCCACATgcagcaatggctttcgtcatccgatcgtgacag > 1:34153813‑M2/1‑34 (MQ=255) ggATCACCAACGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccgatcgtgacagcg > 1:29860357‑M2/1‑32 (MQ=255) tGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaaaa < 1:13968644/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:32882142/67‑1 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGCACTTCTTGGGCAAAAagaaga > 1:13526452/1‑68 (MQ=255) aaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga < 1:10733463/67‑1 (MQ=255) aaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAagag < 1:9095122/68‑1 (MQ=255) aGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAgaga < 1:10140292/68‑1 (MQ=255) gCCATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgccc > 1:3974698‑M1/1‑11 (MQ=255) ccATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:6317507‑M1/1‑10 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccgg < 1:24068196‑M1/68‑60 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:18917324‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:5912892‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:25351924‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:33935987‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttaggtttcccg > 1:30886675‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagagtttagtttgcccgg > 1:28960612‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggcattcgtcatccgatcgtgacagcgtttagtttgcccg > 1:21448629‑M1/1‑9 (MQ=255) cATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg < 1:33190317‑M2/67‑49 (MQ=255) cATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACa > 1:34514332/1‑68 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:27617538‑M1/68‑61 (MQ=255) aTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAg < 1:29343790/68‑1 (MQ=255) aTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAg < 1:19053435/68‑1 (MQ=255) tgctgcGTTCGCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGtt > 1:25621611/1‑68 (MQ=255) gctgcatgtgggaacggagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac < 1:3726234‑M1/68‑64 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:33406692‑M1/1‑5 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:3549344‑M1/1‑5 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggcta > 1:15475314‑M1/1‑5 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:4543010/1‑68 (MQ=255) ctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:22589844/1‑67 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgtcagcgtttagtttgcccggctacac > 1:12151362‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:17884290‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctaca < 1:20392729‑M1/67‑65 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:4819503/1‑68 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:10301937‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:17479826‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:8404479‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:27845231‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:9019097‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:1677087‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:6765281‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:31329616‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:6049982‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:26916672‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:21089796‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:29804579‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:30445714‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:21930826‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:30691904‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:21986959‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:22529948‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:32181823‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:31754774‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcatttagtttgcccggctacacg < 1:31174334‑M1/68‑67 (MQ=255) | ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCG > CP009273/2191186‑2191319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |