| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2590222 = | 340 (0.820) | 15 (0.040) | 7/90 | NT | 5.4% | intergenic (‑126/+42) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| ? | CP009273 | 2590249 = | 254 (0.760) | intergenic (‑153/+15) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase | |||||
Only 100 of 416 total aligned reads displayed.
ACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCG > CP009273/2590155‑2590287 | aCCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGt < 1:11602848/68‑1 (MQ=255)aCCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGt < 1:11892035/68‑1 (MQ=255) tcgaagcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCt < 1:10324401‑M1/3‑1 (MQ=255) tcgaagcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCt < 1:33533058‑M1/3‑1 (MQ=255) cgaagcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCtt < 1:31530392‑M1/4‑1 (MQ=255) cgaagcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCtt > 1:21876700‑M1/65‑68 (MQ=255) acaGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCtt > 1:25427524/1‑68 (MQ=255) gaagcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCtt < 1:12925046‑M1/4‑1 (MQ=255) ggAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGATGTCTTGcc > 1:5391985/1‑68 (MQ=255) agcctatgaagccgtcgcccgccgcctgggggtacagctggactgatttttctgttcatcaTCTTGc > 1:9824890‑M1/62‑67 (MQ=255) gcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCTTGCCg < 1:10107963‑M1/8‑1 (MQ=255) gcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCTTGCCg < 1:4219180‑M1/8‑1 (MQ=255) gcctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCTTGCCg < 1:6992390‑M1/8‑1 (MQ=255) cctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcatcaTCTTGCCGt < 1:23391965‑M1/9‑1 (MQ=255) cctatgaagccgtcgcccgccgcctgggtgtacagctggactgatttttctgttcataaTCTTGCCGt < 1:15369513‑M1/9‑1 (MQ=255) aaaGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCg < 1:9113828/67‑1 (MQ=255) aaaGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGt > 1:20401575/1‑68 (MQ=255) gggATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCa < 1:28003321/67‑1 (MQ=255) gggATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCa > 1:6290982/1‑67 (MQ=255) gggATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCa < 1:5801369/67‑1 (MQ=255) tGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGc < 1:16827761/68‑1 (MQ=255) tGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGc < 1:32073609/68‑1 (MQ=255) gAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGc > 1:8603242/1‑67 (MQ=255) aaTGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACg < 1:16039009/68‑1 (MQ=255) aaTGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACg < 1:28138010/68‑1 (MQ=255) aTGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACg > 1:17887403/1‑67 (MQ=255) aTGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACg > 1:26702350/1‑67 (MQ=255) aTGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACg > 1:20588150/1‑67 (MQ=255) tGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGc < 1:33639687/68‑1 (MQ=255) tGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGc < 1:29559578/68‑1 (MQ=255) tGGCGGAGGAAGGAGCGTGCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGc < 1:16523599/68‑1 (MQ=255) ggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCa > 1:14810869/1‑68 (MQ=255) ggaggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAga > 1:31167391/1‑68 (MQ=255) ggaggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAga > 1:17007967/1‑68 (MQ=255) aaTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGatgatg > 1:15640800/1‑68 (MQ=255) aaTGAGCGTTCAATGAATATATTCCGAGAGCGGTTGTCTTGCCCTTCCAGCTGCACGGCAAGatgatg > 1:16390806/1‑68 (MQ=39) aTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGAtgatga < 1:34421672/68‑1 (MQ=255) aTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGAtgatga < 1:26846853/68‑1 (MQ=255) aTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGAtgatga < 1:6620943/68‑1 (MQ=255) gAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAAc > 1:28851182/1‑68 (MQ=255) tgtacagctggactgatttttctgttaatcaTCTTGCCGGGCCAGCTGCACGGCAAGTTGATGAACAg < 1:26413841‑M1/37‑1 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACa < 1:2750612/67‑1 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:23969065/1‑68 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:22149779/1‑68 (MQ=255) cGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGa > 1:2262750/1‑68 (MQ=255) gTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg < 1:1964316/66‑1 (MQ=255) cagctggactgatttttctgttcatcaTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaaa < 1:34128834‑M1/41‑1 (MQ=255) cAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaaaa < 1:4847114/68‑1 (MQ=255) gctggactgatttttctgttcatctTCTTGCCGTGCCAGCTGCACGGCAAGATGATGCACAGaaaaa < 1:29663513‑M1/42‑1 (MQ=255) aTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATc > 1:10933685/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:3103340/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:33290094/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:19301000/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:24690566/1‑68 (MQ=255) cATATATTCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:3281753/1‑67 (MQ=255) cATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:19882431/1‑67 (MQ=255) atatatTCCGAGTGCGGTTGTCTTGCAGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGt < 1:18440473/67‑1 (MQ=255) atatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGt < 1:29975455/67‑1 (MQ=255) tatataCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTcc > 1:27157115/1‑68 (MQ=255) tatatTCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAGATGTTGAACAGAAAAATCAGTcc > 1:18723554/1‑68 (MQ=255) tatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTcc > 1:30671564/1‑68 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa < 1:1413840/68‑1 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:28439767/1‑68 (MQ=255) tatTCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:8056147/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:9534237/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATAAGTCCa > 1:20305437/1‑67 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:25839673/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:10624621/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:3604088/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:34276293/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:13283026/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:15821978/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:23775246/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:7423076/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:12298311/68‑1 (MQ=255) atTCCGAGAGCGGGTGTCTTGCCGGGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:1437305/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:4611841/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCCGCt < 1:25003448/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCt < 1:32368473/68‑1 (MQ=255) tCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:23009141/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCCAGATGATGAACAGAAAAATCAGTCCa > 1:30493212/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCCGTCCa > 1:14538711/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:21592029/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:21376765/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:27717703/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:16623646/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTg < 1:6148959/68‑1 (MQ=255) ccGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt > 1:13494970/1‑68 (MQ=255) ccGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt < 1:24141790/68‑1 (MQ=255) cGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCATTCCAGCTGt > 1:17216118/1‑67 (MQ=255) agagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac > 1:12753367/1‑67 (MQ=255) agagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac > 1:21109050/1‑67 (MQ=255) agagCGGTTGTCTTGCCCTGCCAGCAGCAAGGCAAGATGATGAACAGATAAATCAGTCCAGCTGGac > 1:26253690/1‑67 (MQ=255) gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTaca < 1:15089594/67‑1 (MQ=255) gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTaca < 1:24479820/67‑1 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:6047713/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGAAGAACAGAAAAATCAGTCCAGCTGTacac > 1:25621757/1‑67 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAccc > 1:3396532/1‑68 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAcc < 1:15193488/67‑1 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAcc < 1:20838870/67‑1 (MQ=255) | ACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCG > CP009273/2590155‑2590287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |