| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2930783 = | NA (NA) | 8 (0.020) | 6/90 | NT | NA | intergenic (+65/‑14) | fucI/fucK | L‑fucose isomerase/L‑fuculokinase |
| ? | CP009273 | 2930811 = | NA (NA) | coding (15/1449 nt) | fucK | L‑fuculokinase | |||||
Only 100 of 815 total aligned reads displayed.
TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 | cctgacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaatat < 1:28511942‑M1/1‑1 (MQ=255) aTACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa > 1:24504308/1‑67 (MQ=255) tACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGc < 1:20220055/68‑1 (MQ=255) acattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc < 1:7731237‑M1/5‑1 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:6615793/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:15013042/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:24195734/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:5901465/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:16729645/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:175388/1‑68 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc > 1:5718451‑M1/63‑67 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc > 1:8193446‑M1/63‑67 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc > 1:20629201‑M1/63‑67 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc > 1:16007395‑M1/63‑67 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCg < 1:28777865‑M1/6‑1 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCg < 1:30426782‑M1/6‑1 (MQ=255) cATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg < 1:27936367/68‑1 (MQ=255) catggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:21296724‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:12326781‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg < 1:32121397‑M1/7‑1 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:189173‑M1/62‑68 (MQ=255) aTTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCgg > 1:2473310/1‑68 (MQ=255) aTTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCgg > 1:31946701/1‑68 (MQ=255) ttACTCCCTGATTTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa < 1:24975715/68‑1 (MQ=255) ttACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa > 1:19847925/1‑68 (MQ=255) tggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGAt < 1:10529909‑M1/9‑1 (MQ=255) ggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa > 1:5367840‑M1/59‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:9301513/1‑68 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:25415814‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:23875205‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:16556194‑M1/10‑1 (MQ=255) cTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa < 1:20975057/68‑1 (MQ=255) cTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa < 1:26638187/68‑1 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:2940076/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:34258932/1‑67 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc > 1:26303883/1‑68 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc < 1:5220557/68‑1 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:15632027/1‑68 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:8560795/1‑68 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:13813948/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:31423550/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:17235547/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:4168200/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:11444750/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGCCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:13512332/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:25812439/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:26812772/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:27090465/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:32940713/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:13012610/1‑68 (MQ=255) gtgatgCCCGGTCGCACCGGCTACCGTGCCTGAACAAGAAAGAGTCGTTAGCCGGATAAGCAATGTTa > 1:29113508/1‑68 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:4459163/1‑67 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:14363519/1‑67 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt < 1:22219076/67‑1 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt < 1:7977135/67‑1 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:709970/1‑67 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:17801100/68‑1 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:9635224/68‑1 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:10927468/68‑1 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:11196107/1‑68 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:21968663/1‑68 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:30745789/1‑68 (MQ=255) gCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:33356928/1‑67 (MQ=255) gCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:23196393/1‑67 (MQ=255) gCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:25584280/1‑67 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:18469332/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:33705451/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt > 1:30144110/1‑68 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt > 1:21580704/1‑68 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt > 1:14139150/1‑68 (MQ=255) ccGGGCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:12675529/67‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat > 1:22673386/1‑68 (MQ=255) gTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata > 1:3315361/1‑68 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:31774275/67‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:11841969/68‑1 (MQ=255) ataacttcttgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTATCCGGCTATATTGCa < 1:19251689‑M1/35‑1 (MQ=255) ggCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa < 1:733047/68‑1 (MQ=255) ggCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa > 1:10131662/1‑68 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:27301824/68‑1 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:6413754/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:32414135/68‑1 (MQ=255) ccTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATg < 1:31149372/67‑1 (MQ=255) ccTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGa > 1:19453187/1‑68 (MQ=255) ccTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGa > 1:29771239/1‑68 (MQ=255) gAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAc < 1:13232240/68‑1 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa > 1:15292527/1‑68 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa > 1:34847182/1‑68 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa < 1:27580811/67‑1 (MQ=255) aagcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaaga > 1:3642563/1‑68 (MQ=255) aagcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaaga > 1:32635248/1‑68 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:12101218/68‑1 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:34521185/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:25200604/1‑68 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:17999853/1‑66 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:14699924/1‑66 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:29954752/1‑66 (MQ=255) aTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:29626495‑M1/67‑1 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:18675253‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:8867451‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:23522148‑M1/1‑67 (MQ=255) | TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |