| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 246 (0.590) | 18 (0.050) | 7/96 | NT | 7.8% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 213 (0.600) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 322 total aligned reads displayed.
GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAT > CP009273/3215146‑3215280 | ggCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTgcgcgc < 1:23357230/68‑1 (MQ=255) gCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCGCGCCCGCCCTGCGcgcc > 1:32532473/1‑68 (MQ=255) gCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:12653567/1‑68 (MQ=255) ttACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:10182768/1‑66 (MQ=255) tACCAGACATTAAAAACGTCACCGGTATTTTAATTGGCGGCAAACCCACGCCCGCCCTGCGCGCCGCt < 1:5231563/68‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:21257740‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:2931603‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:8687404‑M1/5‑1 (MQ=255) aCCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt > 1:2175950/1‑67 (MQ=255) aCCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt > 1:5849168/1‑67 (MQ=255) aCCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt > 1:24506719/1‑67 (MQ=255) cAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGcc > 1:29781435/1‑68 (MQ=255) atatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTGcc < 1:30329717‑M1/8‑1 (MQ=255) atatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCTGcc < 1:8864870‑M1/8‑1 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:28322777/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:31553868/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:27224929/1‑68 (MQ=255) gACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:27867645/1‑67 (MQ=255) aCATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:6968128/1‑68 (MQ=255) aCATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:17137956/1‑68 (MQ=255) aCATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgc > 1:413803/1‑68 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcg < 1:155786/68‑1 (MQ=255) aTTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcgc < 1:33992368/68‑1 (MQ=255) aTTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcgc < 1:6799785/68‑1 (MQ=255) aaaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGtt < 1:9176462/68‑1 (MQ=255) aaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:33280390/1‑68 (MQ=255) aaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:3955484/1‑68 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa < 1:24242930/68‑1 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa > 1:2873303/1‑67 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa > 1:4077930/1‑67 (MQ=255) aaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCGGCCAGCGCGttta > 1:22333771/1‑65 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:25766079/1‑68 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:23238492/1‑68 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:10853697/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:33692154/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:7319791/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:8111816/68‑1 (MQ=255) gTCACCCGTATTTTAATTGACGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:18742316/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGAc < 1:16007678/67‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGAc < 1:21453490/67‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:19513288/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:25142801/68‑1 (MQ=255) aCCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACaa < 1:31280425/68‑1 (MQ=255) aCCGGTATATTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACaa < 1:29135520/68‑1 (MQ=255) ccGGTTTTTAAATTGGCGGCAAACCCACGCGCGGCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:50021/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:1812644/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:13924958/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:1835621/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:7374025/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata > 1:15106181/1‑68 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:34574410/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:23709366/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:19859573/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:2767852/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:19577789/68‑1 (MQ=255) ggTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAatat < 1:27993262/68‑1 (MQ=255) ggTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata > 1:13058743/1‑67 (MQ=255) aTTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata > 1:31749982/1‑64 (MQ=255) aTTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCt < 1:3708922/67‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:9397209/68‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:21865620/68‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:26306406/68‑1 (MQ=255) tttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCCGCGCGTTGACCGACAATATCTGtt > 1:19171630/1‑68 (MQ=255) tttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGtt > 1:7227716/1‑68 (MQ=255) tttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGtt > 1:31937041/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCGCGCGCGTTGACCGTCAATATCTGTTTTa > 1:5433510/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTa > 1:14720662/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:22698489/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:8340480/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:4555345/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:34451872/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:19971086/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCGGCCAGCGCGTTGCCCGACAATATCTGTTTTa > 1:30609178/1‑68 (MQ=255) tttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTAt < 1:34750419/67‑1 (MQ=255) aTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCGGCGCGTTGACCGACAATATGTGTTTTa > 1:23905616/1‑67 (MQ=255) aTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTAt < 1:24876609/68‑1 (MQ=255) aTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTAt < 1:26483039/68‑1 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:12040858/1‑68 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCg > 1:23146505/1‑68 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCg > 1:13142738/1‑68 (MQ=255) gTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGa < 1:15239996/68‑1 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAc < 1:13281788/67‑1 (MQ=255) aaaCCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTc < 1:23832216/67‑1 (MQ=255) tcgatatccaccgcatcgtaaCCGCTGCCAGCGCGTGGACCGACAATATCTGTGTTATCGCCGTTCAc < 1:16856410‑M1/47‑1 (MQ=255) aaCCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCAc > 1:32914122/1‑68 (MQ=255) cccACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGa < 1:11561484/68‑1 (MQ=255) ccaccgcatcgtatCCGCTGCCAGCGCGTTGACCGCCAATATGTGTTTTATCGCCTTTCACGAACCCg < 1:11326739‑M1/54‑1 (MQ=255) ccaccgcatcgtaaCCGCTGCCAGCGCGTTGGCCGACAATAGGTGTTTTATCGACTTTCACGAACCCg < 1:22888288‑M1/54‑1 (MQ=255) ccaccgcatcgtaaCCGCTGCCAGCGCGTTGACCGCCAATATCTGGTTTATCGCGTTTCACGCACCCg < 1:25330156‑M1/54‑1 (MQ=255) ccaccgcatcgtaaCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCg < 1:1765487‑M1/54‑1 (MQ=255) cccgcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCg > 1:22474554/1‑67 (MQ=255) cccgcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCg > 1:29602542/1‑67 (MQ=255) ccgcatcgtaaCCGCTGCCAGCGCGTTGACGGGCAATATCTGTTTTATCGACTTTCCCGAACCCGGCa < 1:7845657‑M1/57‑1 (MQ=255) ccgcatcgtaaCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCa < 1:7093742‑M1/57‑1 (MQ=255) gcatcgtaaCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGc < 1:14860475‑M1/59‑1 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:27334033/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:1924455/1‑68 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:12860180/1‑68 (MQ=255) aCCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:13631966‑M1/67‑1 (MQ=255) CCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:20336233‑M1/68‑1 (MQ=255) | GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAT > CP009273/3215146‑3215280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |