| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3293574 = | 382 (0.920) | 15 (0.040) | 9/90 | NT | 5.3% | coding (250/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein |
| ? | CP009273 | 3293608 = | 231 (0.690) | coding (284/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein | |||||
Only 100 of 556 total aligned reads displayed.
ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 | aCGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAg < 1:33398336/68‑1 (MQ=255) cGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAgg < 1:10279755/68‑1 (MQ=255) cGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAgg < 1:27400614/68‑1 (MQ=255) cGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAgg < 1:34633597/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:26402772/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:20239998/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:17999955/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:6109093/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:17480064/68‑1 (MQ=255) ggCGGAATATCGCGTTAAGCATCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:19136479/67‑1 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:28324630‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:19331150‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:7605157‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:17027248‑M1/65‑67 (MQ=255) gcgctgaatggcgttaccggcctggtttattatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:16634969‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:32056736‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:30945184‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:9161789‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:8558341‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagaatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:7905568‑M1/64‑68 (MQ=255) gCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGt < 1:24786001/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:8783591/67‑1 (MQ=255) tatCGCGTTAAGCAACTTACAATACGGCAAAAAGAGCGTATGGTAGCGGAAGTCGCAGGGTATGCaga > 1:11289434/1‑68 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga < 1:21767683/68‑1 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga < 1:20965896/68‑1 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga < 1:11749289/68‑1 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:29608333‑M1/10‑1 (MQ=255) atCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:18499912/1‑67 (MQ=255) tCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGc < 1:4325968/68‑1 (MQ=255) tCGCGTTAAGCAACTGACCAAACGGCAAAAACAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGc < 1:2756198/68‑1 (MQ=255) tCGAGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGGTTGCAGAGc < 1:14439588/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAGAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:12631133/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:22908684/1‑65 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:33002312/1‑65 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:5910480/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:25966414/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:23725322/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:5475098/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:19898512/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:15385712/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:21350866/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:21579416/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:16062550/68‑1 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:9387673/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:2564073/1‑64 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGtt > 1:10031894/1‑68 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGtt > 1:22282301/1‑68 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:24032371/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:25385578/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:34395217/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:26617975/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:7306159/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:20724755/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:5232240/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:29877010/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:2920775/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCACGGTTTGCAGAGCTGtt > 1:12382999/1‑68 (MQ=255) tAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTaa > 1:4049590/1‑68 (MQ=255) aaCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg < 1:12076352/67‑1 (MQ=255) aaCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGt < 1:33773081/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:3188855/1‑66 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:27979504/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:14627033/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:1686156/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:31237775/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCt > 1:10878706/1‑67 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:20427415/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:26844832/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:3151678/68‑1 (MQ=255) aCCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCa > 1:1582744/1‑68 (MQ=255) aCCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCa > 1:23490544/1‑68 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:6834521/68‑1 (MQ=255) ggCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGc < 1:13685858/45‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:13983049/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:8648904/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:23288935/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:32533665/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:24204975/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:30518843/68‑1 (MQ=255) aaaaGAGCGCCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:9793854/68‑1 (MQ=255) aaaaCAGCGTCTGGTAGCGGAAGGCGCTGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:10523095/68‑1 (MQ=255) aaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAtt > 1:34130998/1‑68 (MQ=255) agagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTa > 1:21173792/1‑68 (MQ=255) gagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaa > 1:4652191/1‑68 (MQ=255) gagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaa > 1:4884871/1‑68 (MQ=255) agCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaaa > 1:24999432/1‑68 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:30458979/67‑1 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaa > 1:22477596/1‑68 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaa < 1:13287250/68‑1 (MQ=255) gCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaaa > 1:5699991/1‑68 (MQ=255) cGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:239242/1‑68 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:30627041/67‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:15076975/1‑67 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:28871517/67‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:3923158/67‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:14704596/68‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:27715742/66‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:29047584/67‑1 (MQ=255) gcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGa > 1:3554411/1‑68 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:24517281/67‑1 (MQ=255) | ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |