New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3509341 =638 (1.530)41 (0.120) 8/94 NT 8.4% intergenic (‑69/+38) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring
?CP009273 3509369 = 355 (1.010)intergenic (‑97/+10) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring

Only 100 of 767 total aligned reads displayed.

TGACTAACTAATTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCA  >  CP009273/3509275‑3509407
                                                                  |                                                                  
tGACTAACTAATTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACt                                                                   <  1:10036239/68‑1 (MQ=255)
tGACTAACTAATTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACt                                                                   <  1:9592394/68‑1 (MQ=255)
   ctaactaaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTccc                                                                <  1:29810395/68‑1 (MQ=255)
   ccaaaaacccgtgggcgaaaccgctgcgtcaggtacaggccgatctgaagtaatcaaggttatCTccc                                                                <  1:3259038‑M1/5‑1 (MQ=255)
    taactaaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCg                                                               <  1:6940322/68‑1 (MQ=255)
      aaaacccgtgggcgaaaccgctgcgtcaggtacaggccgatctgaagtaatcaaggttatCTCCCGCa                                                             >  1:15221257‑M1/61‑68 (MQ=255)
      aaaacccgtgggcgaaaccgctgcgtcaggtacaggccgatctgaagtaatcaaggttatCTCCCGCa                                                             >  1:7791616‑M1/61‑68 (MQ=255)
        taaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAAc                                                           >  1:11424314/1‑68 (MQ=255)
        taaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAAc                                                           >  1:28156190/1‑68 (MQ=255)
        taaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAAc                                                           >  1:2658616/1‑68 (MQ=255)
        taaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAAc                                                           >  1:4866448/1‑68 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:33351805/68‑1 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:13479530/68‑1 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:20065180/68‑1 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:8604241/68‑1 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:15439591/68‑1 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:2457365/68‑1 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:18936867/68‑1 (MQ=255)
         aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:16437970/68‑1 (MQ=255)
          aTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGa                                                         >  1:21146779/1‑68 (MQ=255)
           ttACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGAt                                                        <  1:6462380/68‑1 (MQ=255)
              cacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaa                                                      >  1:28310318/1‑67 (MQ=255)
               acCTTCTCCGGCTGTGGAGAAAGGTCCGACAGCATCCCGCGCTTCAGGCAACTCCCGCAACGATaaa                                                     >  1:3116830/1‑67 (MQ=255)
               acCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAAc                                                    <  1:16018279/68‑1 (MQ=255)
                gcTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAAcc                                                   >  1:29298310/2‑68 (MQ=255)
                        ggCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCggg                                           <  1:15765518/68‑1 (MQ=255)
                         gttgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAATCCATTGCGGga                                          >  1:19876492/3‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:30383286/1‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:17223430/1‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:31703555/1‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:32762782/1‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:20685103/1‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:25880016/1‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:9174085/1‑68 (MQ=255)
                         gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:21830209/1‑68 (MQ=255)
                           tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgaga                                        >  1:27395912/1‑68 (MQ=255)
                           tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgaga                                        >  1:34008863/1‑68 (MQ=255)
                           tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:30779082/67‑1 (MQ=255)
                           tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:9877106/67‑1 (MQ=255)
                           tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:13323315/67‑1 (MQ=255)
                                agagagCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:23809316/67‑1 (MQ=255)
                                agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAACCCATTGCGGGAGATaa                                     >  1:26950043/1‑66 (MQ=255)
                                agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:22286449/67‑1 (MQ=255)
                                agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:1933563/67‑1 (MQ=255)
                                agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:25567300/67‑1 (MQ=255)
                                agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:21570216/67‑1 (MQ=255)
                                agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:807094/67‑1 (MQ=255)
                                   aaGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTg                                >  1:369249/1‑68 (MQ=255)
                                   aaGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTg                                >  1:18223812/1‑68 (MQ=255)
                                    aGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGa                               <  1:29960953/68‑1 (MQ=255)
                                     acaggccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                              <  1:34214819‑M1/39‑1 (MQ=255)
                                        ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                           <  1:33676974/68‑1 (MQ=255)
                                        ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                           <  1:12316532/68‑1 (MQ=255)
                                        ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                           <  1:31504430/68‑1 (MQ=255)
                                        ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                           <  1:18054878/68‑1 (MQ=255)
                                         gccgatctgaagtaatcaaggttatCTCCCGCATCGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:19647847‑M1/43‑1 (MQ=255)
                                         gccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:22941119‑M1/43‑1 (MQ=255)
                                         cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:32300288/68‑1 (MQ=255)
                                         cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:10276789/68‑1 (MQ=255)
                                          gccAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          >  1:7487657/3‑67 (MQ=255)
                                          ccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:6784573‑M1/43‑1 (MQ=255)
                                           aCAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTc                        >  1:8894933/1‑68 (MQ=255)
                                            cAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCa                       >  1:17499350/1‑68 (MQ=255)
                                            cAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCa                       >  1:16754685/1‑68 (MQ=255)
                                            cAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCa                       >  1:26222677/1‑68 (MQ=255)
                                                  ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:28973938/68‑1 (MQ=255)
                                                  ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:27887428/68‑1 (MQ=255)
                                                  ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:11856353/68‑1 (MQ=255)
                                                  ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:3829762/68‑1 (MQ=255)
                                                  ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:24895908/68‑1 (MQ=255)
                                                   cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:34507552/68‑1 (MQ=255)
                                                   cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:11712531/68‑1 (MQ=255)
                                                   cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:4467293/68‑1 (MQ=255)
                                                   cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:2953585/68‑1 (MQ=255)
                                                   cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCAGc                <  1:12630144/68‑1 (MQ=255)
                                                   agtaatcaaggttatCTCCCGCAAGGATAATCCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:13774159‑M1/52‑1 (MQ=255)
                                                    aGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 >  1:28556425/1‑66 (MQ=255)
                                                     gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 >  1:21334210/1‑65 (MQ=255)
                                                     gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 >  1:24230279/1‑65 (MQ=255)
                                                     gcccTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 >  1:25092608/4‑65 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGTcc               <  1:27273920/65‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:5488102/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:22046023/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:22515668/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:16948646/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:5124371/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:12922599/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:4159165/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:14210451/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:13198528/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:33049239/68‑1 (MQ=255)
                                                       gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:14757489/67‑1 (MQ=255)
                                                         ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTa           <  1:6171814/67‑1 (MQ=255)
                                                         ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTa           >  1:18677743/1‑67 (MQ=255)
                                                          tCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTa           >  1:23324132/1‑66 (MQ=255)
                                                            aGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTg       >  1:10562845/1‑68 (MQ=255)
                                                               cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc     >  1:2026317/1‑67 (MQ=255)
                                                               cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc     >  1:31993501/1‑67 (MQ=255)
                                                               cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc     <  1:1097497/67‑1 (MQ=255)
                                                                  CTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCa  <  1:5936969‑M1/67‑1 (MQ=255)
                                                                  |                                                                  
TGACTAACTAATTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCA  >  CP009273/3509275‑3509407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.