| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3847022 = | NA (NA) | 7 (0.020) | 4/88 | NT | NA | intergenic (+20/‑260) | tisB/emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein |
| ? | CP009273 | 3847050 = | NA (NA) | intergenic (+48/‑232) | tisB/emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein | |||||
Only 100 of 653 total aligned reads displayed.
TTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGA > CP009273/3846956‑3847088 | ttgCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCaa > 1:11496523/1‑68 (MQ=255) agagatggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataaaa < 1:27445822‑M1/3‑1 (MQ=255) gagatggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAg < 1:942587‑M1/4‑1 (MQ=255) gagatggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAg < 1:3856169‑M1/4‑1 (MQ=255) tggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGa < 1:1002004‑M1/8‑1 (MQ=255) ggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGa < 1:21054422‑M1/8‑1 (MQ=255) ggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGa < 1:30168072‑M1/8‑1 (MQ=255) aCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAggg < 1:29519904/65‑1 (MQ=255) aCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGa > 1:16038957/1‑67 (MQ=255) aCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGa > 1:19842302/1‑67 (MQ=255) gtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGAGc < 1:8960680‑M1/10‑1 (MQ=255) gtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGAGc < 1:14078748‑M1/10‑1 (MQ=255) gtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGAGc < 1:14471846‑M1/10‑1 (MQ=255) cTGCAACTGCTTTATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGc < 1:16198654/68‑1 (MQ=255) cTGCAACTGCTTGATGCTGTTCTGAAATTCCTGAAGTAATTCATATTCAAGTCGCACCAAAGGGGAGc < 1:20328195/68‑1 (MQ=255) cTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGc < 1:452734/68‑1 (MQ=255) cTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGc < 1:30828496/68‑1 (MQ=255) cTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGc < 1:31673316/68‑1 (MQ=255) cTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGc < 1:2359638/68‑1 (MQ=255) cTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGc < 1:8473878/68‑1 (MQ=255) tagggcggttatgatgcgtcagcttcgcttccgacaccaacccgcacgctaaatataAAAGGGGAGc > 1:14857020‑M1/58‑67 (MQ=255) tGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCg < 1:24206619/68‑1 (MQ=255) aaCTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCggg < 1:29142376/67‑1 (MQ=255) aaCTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGa > 1:3297270/1‑68 (MQ=255) aaCTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGa > 1:26732029/1‑68 (MQ=255) aaCTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGa > 1:34159360/1‑68 (MQ=255) cTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGaa > 1:20719514/1‑67 (MQ=255) gCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAAcc < 1:9778981/68‑1 (MQ=255) cTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAAcc > 1:32614332/1‑67 (MQ=255) cTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAAcc > 1:8116153/1‑67 (MQ=255) tGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTccc < 1:17573852/68‑1 (MQ=255) tGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTccc < 1:24541047/68‑1 (MQ=255) tGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc < 1:5165630/67‑1 (MQ=255) tGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc < 1:31091475/67‑1 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcccc < 1:30483287/68‑1 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc > 1:17374061/1‑66 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCCAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:10631017/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:2797742/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:2608302/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:26403274/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:13156898/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:27065868/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:28424708/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:21215602/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:29399890/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:17047348/67‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:28721011/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:864054/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:31579935/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:13864082/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:34000927/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:19513034/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:7584183/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:15406697/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCGCCCCttt < 1:10834195/68‑1 (MQ=255) tCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTta > 1:13502267/1‑68 (MQ=255) tCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTta > 1:19718098/1‑68 (MQ=255) tCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTta < 1:29890917/68‑1 (MQ=255) cTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtat < 1:19211804/68‑1 (MQ=255) tGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtata < 1:23250206/68‑1 (MQ=255) tGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtata < 1:33417055/68‑1 (MQ=255) tGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtata < 1:1205873/68‑1 (MQ=255) tGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtata < 1:15216531/68‑1 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:25763057/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:25549959/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:11640137/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:15663267/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:219416/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAACTAGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:23424014/1‑68 (MQ=255) aCCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGc > 1:22375279/1‑68 (MQ=255) cTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGt > 1:6648120/1‑68 (MQ=255) cTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGt > 1:22834130/1‑68 (MQ=255) aGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCgg > 1:11779745/1‑68 (MQ=255) gTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg > 1:6783869/1‑68 (MQ=255) gTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg > 1:18904051/1‑68 (MQ=255) gTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg > 1:7108587/1‑68 (MQ=255) tAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGt > 1:31371685/1‑68 (MQ=255) ccaacccgcacgctaaatataAAAGGGGAGCGGGAAACCGCTCCCCTTTTTTATTTAGCGTGCGGGtt < 1:11079989‑M1/47‑1 (MQ=255) ccaacccgcacgctaaatataAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGtt < 1:18261963‑M1/47‑1 (MQ=255) ccaacccgcacgctaaatataAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGtt < 1:18048058‑M1/47‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:5498635/66‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:2159795/66‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:16439198/66‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:12344362/66‑1 (MQ=255) ttCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTgg < 1:32002318/68‑1 (MQ=255) ttCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTgg < 1:5921058/68‑1 (MQ=255) ttCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTgg < 1:23852589/68‑1 (MQ=255) ttCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTgg < 1:24712961/68‑1 (MQ=255) tCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgt < 1:34315648/68‑1 (MQ=255) tCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgt > 1:32220938/1‑68 (MQ=255) cAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgtg < 1:10170599/68‑1 (MQ=255) aTTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCg > 1:25389260/1‑68 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgtgt < 1:33576659/65‑1 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTc < 1:15116425/66‑1 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCg < 1:4878948/67‑1 (MQ=255) tCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGga > 1:3624810/1‑68 (MQ=255) tCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGga < 1:12830888/68‑1 (MQ=255) gTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcg > 1:34541307/1‑68 (MQ=255) gTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcg > 1:25065961/1‑68 (MQ=255) cGCACGAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcgat < 1:6454750/68‑1 (MQ=255) | TTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGA > CP009273/3846956‑3847088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |