| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 138464 = | NA (NA) | 3 (0.010) | 3/94 | NT | NA | intergenic (+10/+31) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase |
| ? | CP009273 | 138487 = | NA (NA) | intergenic (+33/+8) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase | |||||
Only 100 of 532 total aligned reads displayed.
CGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCT > CP009273/138420‑138553 | cGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat > 1:27905888/1‑68 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcttggc < 1:2213149/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc > 1:29169183/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:10006444/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:20583818/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:21907682/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:13857418/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:33584699/1‑68 (MQ=255) atCGGCAAAGTGATTATGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:23049740/1‑68 (MQ=255) tCGGCAAAGTGAGTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAtt < 1:27428661/68‑1 (MQ=255) cGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGTAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:4260461/68‑1 (MQ=255) cGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:30318685/68‑1 (MQ=255) gCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttttt > 1:2991083/1‑68 (MQ=255) gCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttttt > 1:6556423/1‑68 (MQ=255) aaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTAtt > 1:18247862/1‑68 (MQ=255) tgaaacacgccaaccacaaataaaaatgccatgccggatgcaacacatccggcaTGGCATTTTTAtt < 1:24556248‑M2/13‑1 (MQ=255) aGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTAttt > 1:17375884/1‑68 (MQ=255) gATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg < 1:23622475/68‑1 (MQ=255) gATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg > 1:13122138/1‑68 (MQ=255) gATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg > 1:1707806/1‑68 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt > 1:11482990/1‑68 (MQ=255) tgctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTgg < 1:10992363/68‑1 (MQ=255) tgctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTg > 1:18863907/1‑67 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:8625140/68‑1 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:18716100/68‑1 (MQ=255) accacaaataaaaatgccaTGCCGGGTGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtg < 1:22478490‑M1/49‑1 (MQ=255) aCGAGTACGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:3840889/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:16581489/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:23843815/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:22881685/1‑68 (MQ=255) gAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTc > 1:17598746/1‑68 (MQ=255) aataaaaatgccctgccggatgcaacccatccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAg < 1:4734351‑M2/32‑1 (MQ=255) aaGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAg < 1:25584694/66‑1 (MQ=255) aaGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAg < 1:7320093/66‑1 (MQ=255) aaGTGTGAACTTGCCGGATGTGGTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGc < 1:15335538/67‑1 (MQ=255) aGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCtt > 1:527757/1‑68 (MQ=255) aGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCtt > 1:31314961/1‑68 (MQ=255) gtgtGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTg > 1:5731916/1‑68 (MQ=255) tgtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa > 1:466279/1‑68 (MQ=255) tgtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa > 1:2847540/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:591803/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:13603194/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:8336142/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:4159650/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg < 1:10418559/68‑1 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg < 1:20725741/67‑1 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGt < 1:31657569/68‑1 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg < 1:23345986/68‑1 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:19457682/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:25184775/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:1812501/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGc > 1:26461919/1‑58 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:3393887/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:7585590/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:14547010/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:32932585/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:20922564/1‑68 (MQ=255) ttGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGa > 1:22686718/1‑68 (MQ=255) CGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATc > 1:28991729‑M1/1‑68 (MQ=255) CGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATc > 1:13029699‑M1/1‑68 (MQ=255) CGGATGTGTGGCATCCGGCATGGCAATTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAAt > 1:30517736‑M1/1‑67 (MQ=255) GATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATccc < 1:34143152‑M1/68‑1 (MQ=255) GATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATccc < 1:20226727‑M1/68‑1 (MQ=255) GATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATccc < 1:15683748‑M1/68‑1 (MQ=255) TGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCg > 1:24767333‑M1/1‑67 (MQ=255) GTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTg < 1:27236651‑M1/68‑1 (MQ=255) gtTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGTAATCCCGTGAc < 1:12834998/68‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCGGCTTGAGGTTGGAAATCCCGTGACg < 1:28283803/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACgg > 1:9349517/1‑68 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACgg > 1:34504185/1‑68 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACgg > 1:29654683/1‑68 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:1025242/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:8929372/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:6876834/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:26208719/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:13204141/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:15069256/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:16001943/67‑1 (MQ=255) gCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGt > 1:12360462/1‑68 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:29325419‑M2/9‑67 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:28410218‑M2/9‑67 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:5159490‑M2/9‑67 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:2437264‑M2/9‑67 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:14240220‑M2/9‑67 (MQ=255) tccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAAc < 1:11312504‑M2/61‑1 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:32257707‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:9794710‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:9610647‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:9081204‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:19913274‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:4346546‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:30763124‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:32193447‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:32666061‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGATTGAGGTTGGAAATCCCGTGACGGTAACg > 1:10683264‑M2/7‑68 (MQ=255) ggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGtt < 1:6335538‑M2/64‑1 (MQ=255) caTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTg < 1:6724865‑M2/65‑1 (MQ=255) aTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGc < 1:16860847‑M2/66‑1 (MQ=255) aTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGc < 1:8088610‑M2/66‑1 (MQ=255) aTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGc < 1:6280965‑M2/66‑1 (MQ=255) | CGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCT > CP009273/138420‑138553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |