| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 426562 | NA (NA) | 5 (0.010) | 3/90 | NT | NA | intergenic (+154/+23) | yajD/tsx | HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K |
| ? | CP009273 | = 426567 | NA (NA) | intergenic (+159/+18) | yajD/tsx | HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K | |||||
Only 100 of 469 total aligned reads displayed.
AAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGA > CP009273/426500‑426633 | aGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAt > 1:3881868‑M2/1‑67 (MQ=255) aGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAt > 1:25727470‑M2/1‑67 (MQ=255) cGTTTACGCCGCATCCGGCATGAAGAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtc < 1:24928144‑M2/67‑3 (MQ=255) gTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtc > 1:6598953‑M2/1‑64 (MQ=255) tACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggc < 1:9699053‑M2/68‑8 (MQ=255) tACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggc > 1:28950274‑M2/1‑61 (MQ=255) aCGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggca > 1:1653756‑M2/1‑60 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:10149933‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:9281131‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:8114524‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:23736875‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:19938258‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:13397248‑M2/68‑10 (MQ=255) ccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcattt < 1:8842783‑M2/68‑12 (MQ=255) cgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcattt > 1:7649392‑M2/1‑56 (MQ=255) cgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAtttt < 1:12781969/68‑1 (MQ=255) cATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGTCATTTTCATAATCAg > 1:29517254/1‑68 (MQ=255) cATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCa < 1:24740113/67‑1 (MQ=255) cATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCa < 1:34819670/67‑1 (MQ=255) cATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAg > 1:12956893/1‑68 (MQ=255) cATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAAAAAAtcccggcatttctgattgtt > 1:31133596‑M2/1‑47 (MQ=255) tGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGaa < 1:14823424/68‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATATATCCCGGCATTTTCATAATCAGAAGtt > 1:34408746/1‑68 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt > 1:22402813/1‑68 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt > 1:28526032/1‑68 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt > 1:12658196/1‑68 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:20091696/67‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:31670339/67‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:12138825/67‑1 (MQ=255) cAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTg > 1:11185773/1‑68 (MQ=255) cAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTg > 1:21023550/1‑68 (MQ=255) aaaGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGt < 1:26600092/68‑1 (MQ=255) aGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa < 1:30895597/68‑1 (MQ=255) gCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa > 1:1007743/1‑67 (MQ=255) gCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa > 1:32089250/1‑67 (MQ=255) gCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa > 1:5527793/1‑67 (MQ=255) gCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa > 1:6423583/1‑67 (MQ=255) gCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa > 1:15460407/1‑67 (MQ=255) gCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc > 1:7077115/1‑68 (MQ=255) cacaCGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc > 1:28028700/1‑67 (MQ=255) cacaCGTTGTTAACAATCAGAAAAGCCGTGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:26114691/68‑1 (MQ=255) acacGTTGTTAACAATCATAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:6815519/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:20314438/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:5042653/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:8573773/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:13967648/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc < 1:4880317/66‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc < 1:25551790/66‑1 (MQ=255) cacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACct > 1:21919824/1‑67 (MQ=255) acGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctac < 1:27797641/68‑1 (MQ=255) acGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctac < 1:25187751/68‑1 (MQ=255) cGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCGTTTTCATAATCAGAAGTTGTAACctact < 1:27172893/68‑1 (MQ=255) cGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctact < 1:30724322/68‑1 (MQ=255) cGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctact > 1:19107752/1‑68 (MQ=255) cGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctact > 1:7947886/1‑68 (MQ=255) cGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctact > 1:15248119/1‑68 (MQ=255) tgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCtactac < 1:3295459/67‑1 (MQ=255) tgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTAcc < 1:3138137/68‑1 (MQ=255) gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa < 1:11688828/68‑1 (MQ=255) gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa < 1:18795842/68‑1 (MQ=255) gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa < 1:6229644/68‑1 (MQ=255) tAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg < 1:17145402/68‑1 (MQ=255) tAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg < 1:1568184/68‑1 (MQ=255) aaCAATCAGAAATGCCTGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:4033721/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt < 1:5214340/68‑1 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:11535901/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt < 1:34068629/68‑1 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:33202402/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:5967079/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:19350046/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:16250575/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:15806625/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:29720862/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt < 1:28297520/68‑1 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:22928080/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:23155984/1‑68 (MQ=255) aCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa > 1:19776334/1‑68 (MQ=255) aCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa > 1:2262178/1‑68 (MQ=255) cAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa > 1:14190535/1‑67 (MQ=255) cAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa > 1:18403053/1‑67 (MQ=255) aTCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacc > 1:24509137/1‑68 (MQ=255) aTCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacc > 1:30285098/1‑68 (MQ=255) aTCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacc > 1:33625707/1‑68 (MQ=255) aTCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacc > 1:17882947/1‑68 (MQ=255) tCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacca < 1:13705587/68‑1 (MQ=255) cAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAaccac < 1:3249214/68‑1 (MQ=255) AATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAaccacc > 1:10510387‑M1/1‑65 (MQ=255) AATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCAccc > 1:29846005‑M1/1‑66 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:4591660‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:20608776‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:1633516‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:10964896‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:24283952‑M1/1‑68 (MQ=255) GCCGGGAATAAATCCCGGCATTTTCATAATCTGAAGTTGTAACCTACTACCAGGTAACCCCCCCAGcc < 1:21481917‑M1/68‑1 (MQ=255) GCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc < 1:17303656‑M1/68‑1 (MQ=255) GCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc > 1:29960063‑M1/1‑68 (MQ=255) AATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTag > 1:29125645‑M1/1‑67 (MQ=255) aTAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTagag < 1:12268022/68‑1 (MQ=255) aTCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGa > 1:15578726/1‑67 (MQ=255) aTCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGa > 1:27376724/1‑67 (MQ=255) | AAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGA > CP009273/426500‑426633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |