New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 902734177 (0.420)11 (0.030) 5/98 NT 6.4% coding (1005/1431 nt) ybjT putative NAD‑dependent oxidoreductase
?CP009273 = 902785 168 (0.460)coding (954/1431 nt) ybjT putative NAD‑dependent oxidoreductase

Only 100 of 256 total aligned reads displayed.

AAGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCT  >  CP009273/902718‑902851
                                                                   |                                                                  
aaGCAGCAAGGCTGGCGGACGTTTTATCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGt                                                                    <  1:29082894/68‑1 (MQ=255)
 agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:23640955‑M2/68‑2 (MQ=255)
 agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:126814‑M2/68‑2 (MQ=255)
 agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:26125240‑M2/68‑2 (MQ=255)
 agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   >  1:12252130‑M2/1‑67 (MQ=255)
  gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:7514825‑M2/67‑2 (MQ=255)
  gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:16265378‑M2/67‑2 (MQ=255)
  gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:3046708‑M2/67‑2 (MQ=255)
          gCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg                                                           >  1:29589746/1‑67 (MQ=255)
           cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCggg                                                          <  1:33319562/67‑1 (MQ=255)
            tGGCGGACTTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc                                                         <  1:16794645/67‑1 (MQ=255)
            tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc                                                         <  1:13686393/67‑1 (MQ=255)
            tGGCGGACGTTTTAACGGTAAACCCCGCCTGGTTGGCAAATTAACCGTACTCCGGGCGCCAGCGGGc                                                         <  1:33223652/67‑1 (MQ=255)
             ggCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCaa                                                       <  1:482308/68‑1 (MQ=255)
               cGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAg                                                     >  1:22490850/1‑68 (MQ=255)
               cGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAg                                                     >  1:31650594/1‑68 (MQ=255)
                ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgct                                                    >  1:30208825‑M2/1‑52 (MQ=255)
                ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgc                                                     >  1:5345212‑M2/1‑52 (MQ=255)
                ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg                                                    <  1:2113118/68‑1 (MQ=255)
                ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg                                                    <  1:11456992/68‑1 (MQ=255)
                ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAg                                                     >  1:23098377/1‑67 (MQ=255)
                  aCGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGc                                                   <  1:18415487/67‑1 (MQ=255)
                         aaCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgt                                           <  1:1120434/68‑1 (MQ=255)
                         aaCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgt                                           <  1:2006152/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAATTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:33541689/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:22068188/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:22847658/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:1823490/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:33897943/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:2492854/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:6135054/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:25954012/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:7217588/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          >  1:1260733/1‑68 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:12456363/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:30010607/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:9225408/68‑1 (MQ=255)
                          aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          >  1:11614516/1‑68 (MQ=255)
                           cGGTAACCCCCGCCTGTGTGGCAAAATAACCGTCCTCCGGTcgccagccttgctgctttatggcaggt                                         >  1:30148121‑M2/1‑41 (MQ=255)
                           cGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcg                                         >  1:28966267/1‑68 (MQ=255)
                            ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt                                        <  1:32756345/68‑1 (MQ=255)
                            ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt                                        >  1:26498229/1‑68 (MQ=255)
                            ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt                                        >  1:30945673/1‑68 (MQ=255)
                             gTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:17920070/65‑1 (MQ=255)
                               aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGc                                     <  1:26895827/68‑1 (MQ=255)
                               aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGGCGCCAGCGGGCAAAGGCCTGAGCGTCGTAg                                      <  1:25188587/67‑1 (MQ=255)
                                  ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc                                  >  1:20753102/1‑68 (MQ=255)
                                  ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGAGGGCAAAGGCCTGAGCGTCGTAGcccc                                  >  1:187388/1‑68 (MQ=255)
                                   cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa                                 >  1:18841458/1‑68 (MQ=255)
                                   cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa                                 >  1:10720298/1‑68 (MQ=255)
                                   cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa                                 >  1:867332/1‑68 (MQ=255)
                                    ccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAg                                <  1:1208092/68‑1 (MQ=255)
                                      gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc                              <  1:2184514/68‑1 (MQ=255)
                                      gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc                              <  1:25038680/68‑1 (MQ=255)
                                      gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc                              <  1:9639107/68‑1 (MQ=255)
                                        cTGTTTGGCAAAATAACCGTACTCCTGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg                             <  1:6976696/67‑1 (MQ=255)
                                        cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc                              >  1:30834330/1‑66 (MQ=255)
                                        cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg                             <  1:15275497/67‑1 (MQ=255)
                                        cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg                             <  1:19192272/67‑1 (MQ=255)
                                                 aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTg                    >  1:33142785/1‑67 (MQ=255)
                                                 aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGa                   <  1:22695509/68‑1 (MQ=255)
                                                      aaCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGCCCAGt              >  1:10497877/1‑68 (MQ=255)
                                                       aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt             <  1:27830142/68‑1 (MQ=255)
                                                       aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt             <  1:14462606/68‑1 (MQ=255)
                                                       aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt             <  1:24082077/68‑1 (MQ=255)
                                                         cGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtttt           >  1:13657012/1‑68 (MQ=255)
                                                         cGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtttt           >  1:17396859/1‑68 (MQ=255)
                                                            aCTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcc        <  1:31500323/68‑1 (MQ=255)
                                                             cTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       <  1:13327827/68‑1 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTGGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctc      <  1:15023351/68‑1 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:10107295/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:28149964/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:507363/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:19020250/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:26597599/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:32222071/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:22347216/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:24637178/1‑67 (MQ=255)
                                                              tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:24224082/1‑67 (MQ=255)
                                                               ccGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:12413099/1‑66 (MQ=255)
                                                                cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct    <  1:1421100/68‑1 (MQ=255)
                                                                cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct    <  1:23695579/68‑1 (MQ=255)
                                                                cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct    <  1:15735299/68‑1 (MQ=255)
                                                                cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct    <  1:799277/68‑1 (MQ=255)
                                                                 ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctcc     >  1:16162199/1‑66 (MQ=255)
                                                                 ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCctcctc   <  1:32538923/68‑1 (MQ=255)
                                                                 ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCctcctc   <  1:27260021/68‑1 (MQ=255)
                                                                 ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCctcctc   <  1:24099303/68‑1 (MQ=255)
                                                                  gTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  >  1:13247770/1‑68 (MQ=255)
                                                                  gTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  >  1:5205317/1‑68 (MQ=255)
                                                                  gTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  >  1:34801051/1‑68 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:1192261/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:27504618/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:6621584/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:4905154/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:4051539/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:3988061/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:20356561/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:33072123/67‑1 (MQ=255)
                                                                   tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:21004082/67‑1 (MQ=255)
                                                                   |                                                                  
AAGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCT  >  CP009273/902718‑902851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.