| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910536 = | NA (NA) | 15 (0.040) | 8/92 | NT | 10.9% | intergenic (‑223/+272) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910538 = | 150 (0.360) | intergenic (‑225/+270) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 433 total aligned reads displayed.
ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 | atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:31737527‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:31528536‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:3199122‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:30702570‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:1208269‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:3773773‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:26237719‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:17665214‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:14999252‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:21829251‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:18362116‑M2/1‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:16571010/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:19894087/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:17005599/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:7874072/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:6988021/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:6787320/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:20535947/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:21282442/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:22013939/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:22174483/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:5015346/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:27363344/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:33245024/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:12749381/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:12462952/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:14123060/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:11872321/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:1158434/1‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:9155412‑M2/67‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:30255456‑M2/67‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtgacatccctgtaaaacgcgcgctcagcccacatccAtg > 1:25045670‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:7203486‑M2/66‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:15264701‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:287373‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:14269562‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:8189584‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:8689253‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:15969941‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:10111248‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:13492665‑M2/65‑68 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:11283951‑M2/6‑1 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:10865624‑M2/6‑1 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:13025046‑M2/6‑1 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:16366999‑M2/6‑1 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:15494449‑M2/6‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:28913335/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:34233826/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:26546538/1‑68 (MQ=255) tacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTggg < 1:14827007‑M2/7‑1 (MQ=255) tacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:9350132‑M2/62‑67 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:8507632‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:15140154‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:6446754‑M2/61‑66 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:2775070/1‑65 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:20884855/1‑65 (MQ=255) cggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:4546879‑M2/60‑65 (MQ=255) cggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt < 1:13156083‑M2/9‑1 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:22382189‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:33568840‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:14444255‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:24889666‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:24053244‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:23074320‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg < 1:32530042‑M2/10‑1 (MQ=255) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa < 1:4324905/68‑1 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:32103112/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:570823/1‑68 (MQ=39) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:34581441‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:1076941‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:7715734‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:29846456‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:252494‑M2/58‑67 (MQ=255) gTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAg > 1:355167/1‑68 (MQ=37) tggtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg < 1:19469109/67‑1 (MQ=35) tggtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg > 1:25825146/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCCGAGGgc > 1:27852642/1‑67 (MQ=25) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:13726797/1‑68 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:33000182/1‑68 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGcgcg > 1:33832813/1‑68 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGcgcg > 1:3941778/1‑68 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGcgcg > 1:12283859/1‑68 (MQ=35) cGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:29572595/67‑1 (MQ=35) gTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGttt > 1:18740993/1‑68 (MQ=35) gTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtt < 1:28320335/67‑1 (MQ=35) gggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTGAGGGCGCGtttt < 1:22696703‑M2/22‑1 (MQ=255) cAAAATCGCCGCGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGGGGGCTGAGGGCGCGtttt < 1:28135675/67‑1 (MQ=255) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:27217755/67‑1 (MQ=35) aaaaTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTAc < 1:17408214/68‑1 (MQ=35) aaaTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACa < 1:18187495/68‑1 (MQ=35) aTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAgg > 1:31119940/1‑68 (MQ=35) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:21598627/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:16122203/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:18962104/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:20060245/68‑1 (MQ=33) tCGCCGAGGCGTGCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:29977731/68‑1 (MQ=18) cGCCGAGGCGTTCCCTGAAGGCGGTGGCAGCCCACATGGATGTGGGATGAGGGCGCGTTTTACAGGGa < 1:13945479/68‑1 (MQ=11) taacatccctgtaaaccgcgccctcagcccacatccATGTGGGCTGAGGGCGCGTTTTACAGGGAt < 1:9640765‑M2/30‑1 (MQ=255) taacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTGAGGGCGCGTTTTACAGGGAt < 1:23441827‑M2/30‑1 (MQ=255) ATGGGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATaa < 1:6037967‑M2/67‑1 (MQ=255) | ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |