| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1264549 = | NA (NA) | 9 (0.030) | 6/94 | NT | NA | intergenic (+74/+75) | kdsA/ldrA | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase/toxic polypeptide, small |
| ? | CP009273 | 1264575 = | NA (NA) | intergenic (+100/+49) | kdsA/ldrA | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase/toxic polypeptide, small | |||||
Only 100 of 713 total aligned reads displayed.
TCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCG > CP009273/1264508‑1264615 | tCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCg > 1:9642389/1‑68 (MQ=255)tCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCg > 1:14415804/1‑68 (MQ=255)tCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCg > 1:15092428/1‑68 (MQ=255)tCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCg > 1:18392346/1‑68 (MQ=255)tCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCg > 1:2354409/1‑68 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGt < 1:30614493/68‑1 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGt < 1:21303949/68‑1 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGt < 1:15729663/68‑1 (MQ=255) gCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGtt > 1:25609413/1‑68 (MQ=255) gCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGtt < 1:20310037/68‑1 (MQ=255) gCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGtt > 1:33858686/1‑68 (MQ=255) gCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGtt > 1:5402622/1‑68 (MQ=255) gTTAAGACTTTTTTCATGGTTGCGGGTAACAAAAAAGCCCGCAGGATTTAACCCATCGGCCCGGttac > 1:13636964/1‑66 (MQ=255) gTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTc > 1:29404674/1‑68 (MQ=255) gTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTc > 1:26219922/1‑68 (MQ=255) aaGACTTTTTTCATGGGTGCCGGATACAAAAACGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg < 1:14146439/68‑1 (MQ=255) aaGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg < 1:24790432/68‑1 (MQ=255) aaGACTTTTATCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg < 1:32301365/68‑1 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAATGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:17242301/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:29952809/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:6969190/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:22916811/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:1210751/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:24461795/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:26826117/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:16679857/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:16370082/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:32017875/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:13145863/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:8927764/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc > 1:29697668/1‑67 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:27246397/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:33527425/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:4995695/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:22441086/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:22666233/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:2225675/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:5155356/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:6152899/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:16001723/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:807375/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:73427/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa > 1:13889454/1‑68 (MQ=255) cTTTTTTCATGGGTGCCGGAAACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa < 1:30979892/68‑1 (MQ=255) ttttttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCat < 1:6448349/68‑1 (MQ=255) ttttttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCat < 1:28453297/68‑1 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATAtt > 1:19001965/1‑67 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATAtt > 1:18608230/1‑67 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATAtt > 1:26000819/1‑67 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATAtt > 1:1693157/1‑67 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTg < 1:17985257/68‑1 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTg < 1:3931416/68‑1 (MQ=255) tCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGc < 1:29161019/68‑1 (MQ=255) cATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGTCGCATATTGcc < 1:23126078/68‑1 (MQ=255) cATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGcc > 1:26555714/1‑68 (MQ=255) aTGTGTGCCGGATAAAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGAATATTGCCa < 1:30262536/68‑1 (MQ=17) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:11029657/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:12338098/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:11443360/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:6638601/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:20559153/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCGGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:24533618/68‑1 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGTCCGGTTTCGGGCGCATATTGACAt > 1:1286348/1‑68 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:8289063/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:32767408/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:13451065/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:9084930/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:28778221/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:11203783/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:17692140/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:12626404/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:25234063/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:15489452/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:5953812/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:10596432/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:4735598/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:4278239/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:34220684/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:34771555/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:10030305/1‑67 (MQ=255) gTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCa < 1:10176158/67‑1 (MQ=255) tGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCAc < 1:21845446/67‑1 (MQ=255) gCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACg > 1:28186776/1‑67 (MQ=255) gCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACg < 1:11813537/67‑1 (MQ=255) cGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGc < 1:14793358/67‑1 (MQ=255) aTACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:19714865/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:5629140/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:3292568/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:23987588/1‑66 (MQ=39) tACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCt < 1:27656830/68‑1 (MQ=37) aCAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTg > 1:7818821/1‑68 (MQ=35) aaaaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc > 1:2698372/1‑67 (MQ=35) aaaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACg > 1:10890845/1‑67 (MQ=35) aaaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACg > 1:19391782/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGcc < 1:33275370/68‑1 (MQ=35) aaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:20895499/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:12492741/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:8685708/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:1457801/1‑67 (MQ=35) aGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCg < 1:31595550/68‑1 (MQ=31) | TCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCG > CP009273/1264508‑1264615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |