| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3615349 = | NA (NA) | 9 (0.030) | 8/96 | NT | 100% | coding (2798/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | 3615372 = | 0 (0.000) | coding (2821/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
Only 100 of 247 total aligned reads displayed.
CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCG > CP009273/3615305‑3615439 | ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:8559246‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:20972469‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:5289995‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:4253685‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:32865873‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:15035687‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:12548087‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:31451286‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:31347707‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:25424038‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:25651830‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccgggaaagctagtgcgc > 1:31609087‑M2/68‑68 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:1740674‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:10062461‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:17863233‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:22077810‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:27359860‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:29280162‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:32241149‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:3723422‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:6073794‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:7856883‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:95276‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:15703988‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:13470870‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:10385589‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:11136453‑M2/2‑1 (MQ=255) cttccgggatgaggtcggtttgctctgtcagcctgccgtgacgggcataccggtaaagatagtgcgcg < 1:22441859‑M2/2‑1 (MQ=255) cttccgggatgaggtcggggttctctggcagcctgccgtgacgggcataccggtaaagatagtgcgcg < 1:2449303‑M2/2‑1 (MQ=255) cttccgggatgagggcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:13962218‑M2/2‑1 (MQ=255) ttccgggatgaggtcggttttctctgtcatcctgccgtgacggtcataccggtaaagatagtgcgcg > 1:4879036‑M2/66‑67 (MQ=255) ttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGt < 1:26584255‑M2/3‑1 (MQ=255) ttccgggatgaggtcgggtttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGt < 1:10998883‑M2/3‑1 (MQ=255) ttccgggatgagggcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcgg < 1:10680524‑M2/3‑2 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:21746999‑M2/4‑1 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:514615‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:12350829‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:14579148‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:1472701‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:5708075‑M2/64‑67 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgccggtcataccggtaaagatagtgcgCGTCAc > 1:34674757‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:2846901‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:17151147‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:13244349‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:32265954‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:26281870‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:25985251‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:33712904‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:24629272‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:6730518‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:22841310‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:8350128‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:7692766‑M2/63‑68 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg < 1:74682‑M2/7‑1 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg > 1:27671674‑M2/62‑68 (MQ=255) gatgaggtcggttttctctgtcggcctgccgggacggtcataccggtaaagatagtgcgCGTCACgg > 1:23440396‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:30814216‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:2821275‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:29996712‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:26995061‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:21198745‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:15287256‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:23276963‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:2523813‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:24738602‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:12051300‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCATGACgg > 1:23749212‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgcagttacggtcataccggtaaagatagtgcgCGTCACgg > 1:18132791‑M2/60‑67 (MQ=255) gatgacgtcgggtttctcagtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:3894223‑M2/8‑1 (MQ=255) cggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACGGCAGGCTGa < 1:3436940‑M2/16‑1 (MQ=255) tcataccggtaaagatagtgcgCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAgggg > 1:16561751‑M2/23‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGCAAACCGACCACATCCCGGAAGGGGTTAACCGCAGGGATGATGAGc > 1:21503491‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGcgcg > 1:27947096‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:21046059‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:18954732‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:25911576‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:31714745‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:15730366‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:24614590‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:6634829‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:10146408‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:3920448‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:10009492‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:20497111‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:16210050‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:17749172‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:18194168‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:1882745‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:19004175‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:19222412‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg < 1:19734785‑M2/68‑1 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:20375630‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:11663472‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:251967‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:14445431‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:29595301‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg < 1:30457358‑M2/68‑1 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:13790059‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:33058573‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:33983508‑M2/1‑68 (MQ=255) | CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCG > CP009273/3615305‑3615439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |