| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3832491 = | 385 (0.920) | 17 (0.050) | 5/96 | NT | 6.5% | coding (884/924 nt) | yicL | EamA family inner membrane putative transporter |
| ? | CP009273 | 3832524 = | 160 (0.450) | coding (917/924 nt) | yicL | EamA family inner membrane putative transporter | |||||
Only 100 of 359 total aligned reads displayed.
TCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACTTC > CP009273/3832457‑3832591 | tCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCa > 1:33012161/1‑68 (MQ=255)tCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCa > 1:28528199/1‑68 (MQ=255)tCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCa > 1:28863229/1‑68 (MQ=255) cATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCAt > 1:34286576/1‑68 (MQ=255) cATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCAt > 1:23447699/1‑68 (MQ=255) cATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCAt > 1:7053822/1‑68 (MQ=255) cATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCAt > 1:28966239/1‑68 (MQ=255) aTCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATa > 1:24667620/1‑68 (MQ=255) aTCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATa > 1:25937000/1‑68 (MQ=255) ggcgcggtgcctggctggtaattctcactttgccgcgccggacgatttatttttctggcgcggcATaa < 1:18061886‑M2/4‑1 (MQ=255) cgcggtgcctggctggtaattctcacttatgccgcgccggacgatttatttttctggcgcggcATaa < 1:18826678‑M2/4‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:20362080/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:16839353/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:6352976/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:1604945/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:9707663/68‑1 (MQ=255) ggTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGt < 1:22061323/68‑1 (MQ=255) ggTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGt > 1:3882769/1‑68 (MQ=255) gcggtgcctggcttgtaattctcacttatgccgcgcctgacgatttatttttctggcgcggcATAAg < 1:8141105‑M2/5‑1 (MQ=255) gcggtgactggctggtaattctcacttatgcctcgccggacgatttatttttctggcgcggcATAAg < 1:17028779‑M2/5‑1 (MQ=255) gTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTg > 1:30467629/1‑68 (MQ=255) gTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTg > 1:15578408/1‑68 (MQ=255) gTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTg > 1:25012014/1‑68 (MQ=255) ggtgcctggctggtaattctcacttatgccgcgccggacgatttatttttctggcgcggcATAAGTga < 1:23693913‑M2/8‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:7266450/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:29576381/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:5738358/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:19716996/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:2691907/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:27923047/68‑1 (MQ=255) attttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgaga > 1:5548382/1‑68 (MQ=255) attttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:13887392/67‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:17172134/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:3152775/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:23119779/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:7750443/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:20086095/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:1181063/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:20670021/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:21823073/68‑1 (MQ=255) ggctggtaattcccactaatgccgcgccggacgatttatttttctggcgcggcATAAGTGAGAATTAc < 1:18503040‑M2/15‑1 (MQ=255) gctggtaattctcacttatGCCGCGGCAGAATAATAAATCGTCCGGCGCGGGATAAGTGAggatttcc < 1:13846572‑M1/49‑4 (MQ=255) gctggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAc < 1:4448025‑M1/48‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAATTAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:26734497/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:22291178/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTCAGAATTAcca < 1:25626471/68‑1 (MQ=255) tggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:21083967‑M1/50‑1 (MQ=255) tggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGGGAGAATTAcca < 1:3044909‑M1/50‑1 (MQ=255) tCAATGGCTTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:12394945/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:13065240/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:32298329/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:10018178/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:22355616/68‑1 (MQ=255) ggtaattctcacttatgccgcgccggacgatttatttttctggcgcggcATAAGTGAGAATTAccagc < 1:32564492‑M2/19‑1 (MQ=255) ggtaattctcacttatgccgcgccggacgatttatttttcaggcgcggcATAAGTGAGAATTAccagc < 1:4524203‑M2/19‑1 (MQ=255) aaTGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagcca < 1:29776600/68‑1 (MQ=255) aTGGATTCCCGTCGCCGCGCCTGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagccag > 1:15207038/1‑68 (MQ=255) aTGGATTCCCGACGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagccag > 1:15904973/1‑68 (MQ=255) tGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:33600525/62‑1 (MQ=255) tGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAgg < 1:19055735/68‑1 (MQ=255) ggATTCGCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc < 1:17502106/68‑1 (MQ=255) tctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCCGGc < 1:1935780‑M1/57‑1 (MQ=255) aTTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa < 1:22955315/67‑1 (MQ=255) ttCCCGTCGCTGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc < 1:11025851/68‑1 (MQ=255) ttCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc > 1:14947281/1‑68 (MQ=255) ttCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc < 1:34647596/68‑1 (MQ=255) ttCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc < 1:14565274/68‑1 (MQ=255) tcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGCGAATTACCAGCCaggcccc < 1:22509662‑M1/60‑4 (MQ=255) cccGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc > 1:8387836/1‑68 (MQ=255) cttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc < 1:17780797‑M1/62‑1 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:16663292/1‑67 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:30960903/1‑67 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:9156627‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:16303256‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:10738475‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc > 1:1060152‑M1/1‑68 (MQ=255) CCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCg < 1:19552204‑M1/68‑1 (MQ=255) CGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGt < 1:18528819‑M1/68‑1 (MQ=255) CGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTCAGAATTACCAGCCAGGCACCGCGCCACCg > 1:5384737‑M1/1‑67 (MQ=255) CCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTaaa < 1:29290666‑M1/68‑1 (MQ=255) aaaaTAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTaaaaa < 1:10399822/65‑1 (MQ=255) aaaaTAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATgg > 1:2611382/1‑68 (MQ=255) aaaaTAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACAGCGCCACCGTTAAAAATgg > 1:24442099/1‑68 (MQ=255) taaatCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTc < 1:26341771/68‑1 (MQ=255) aaatCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGtt > 1:14168523/1‑65 (MQ=255) aaatCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCt < 1:8704355/68‑1 (MQ=255) atCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTg > 1:3387521/1‑67 (MQ=255) atCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTg > 1:27265643/1‑67 (MQ=255) cGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGcc > 1:4829102/1‑67 (MQ=255) gTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGc < 1:12853321/68‑1 (MQ=255) cgcggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAg < 1:611305‑M2/61‑1 (MQ=255) gcggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCg > 1:9549689‑M2/6‑68 (MQ=255) ggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGa < 1:21427094‑M2/64‑1 (MQ=255) ggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGa < 1:16524651‑M2/64‑1 (MQ=255) ggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGa < 1:14729811‑M2/64‑1 (MQ=255) ggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGAc < 1:24163621‑M2/65‑1 (MQ=255) ggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGAc < 1:2837643‑M2/65‑1 (MQ=255) ggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGGTTCTGCCGCTTTAGCGAc < 1:17816377‑M2/65‑1 (MQ=255) cATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACt < 1:31946017‑M2/66‑1 (MQ=255) aTAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACTTc < 1:2709535/68‑1 (MQ=255) | TCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACTTC > CP009273/3832457‑3832591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |