New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 3632677 | NA (NA) | 3 (0.010) | 3/112 | NT | NA | intergenic (+176/+68) | pitA/uspB | phosphate transporter, low‑affinity; tellurite importer/universal stress (ethanol tolerance) protein B |
? | CP009273 | = 4127852 | NA (NA) | intergenic (‑267/+8) | yijF/gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
GCAATTTTGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3632665‑3632677 ‑‑‑‑‑‑‑‑‑‑‑‑‑CAAACTCCCGGCTTGTCCGGGAGTTTGAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT < CP009273/4127852‑4127788 GCAATTTTGCGTTCAAACTCCCGGCTTGTCCGGGAGTTTGAACGCAAAATTGCCTGATGCGCTACGCT > 1:9214677/1‑68 CAATTTTGCGTTCAAACTCCCGGCGTGTCCGGGAGTTTGAACGCAAAATTGCCTGATGCGCTACGCTT > 1:31091318/1‑68 TTTGCGTTCAAACTCCCGGCTTGGCCGGGAGGTTGAACGCATAATTGCCTGATGCGCTTCGGGTATCA > 1:6604478/1‑68 GCGTTCAAACTCCCGGCTTGTCCGGGAGGTTGAACGCAAAATTGCCTGATGCGCTACGCTTATCAGG > 1:32265951/1‑67 GTTCAAACTCCCGGCTTGTCCTGGAGTTTGAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT > 1:2386065/1‑68 GCAATTTTGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3632665‑3632677 ‑‑‑‑‑‑‑‑‑‑‑‑‑CAAACTCCCGGCTTGTCCGGGAGTTTGAACGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT < CP009273/4127852‑4127788 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |