| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4156417 = | NA (NA) | 10 (0.020) | 4/112 | NT | NA | intergenic (+204/‑170) | murI/rrsB | glutamate racemase/16S ribosomal RNA of rrnB operon |
| ? | CP009273 | 4197929 = | NA (NA) | intergenic (‑469/‑146) | purH/rrsE | fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon | |||||
AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4156458‑4156417‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCG > CP009273/4197929‑4197993 AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCACTGCTCTTTAACAATTTATCAGACA < 1:30594680/68‑1AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCACTGCTCTTTAACAATTTATCAGACA < 1:19143219/68‑1 TGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCACCGGCACTGCTCTTTAACAATTTATCAGACAATCT < 1:22804196/68‑1 TAACGAGCAGTCCCGCTTCGCTTTATCTCAGCGGCACTGCTCTTTAACAATTTATCAGAAAATCTGT < 1:5260863/67‑1 TAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGT < 1:19150081/67‑1 cCCGCTTCGCTTTTTCTCAGCGGCACTGCTCTTTAACAATTTATCAGAAAATCTGTGTGGGCACT < 1:29176369/64‑1 AGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACG > 1:10660456/1‑68 AGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACG > 1:4500073/1‑68 AGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACG < 1:19297002/68‑1 AGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAC < 1:13884867/67‑1 GCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACG > 1:10280440/1‑67 GCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACG > 1:9323329/1‑67 GCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACG > 1:13040751/1‑67 GCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGCCACTCGAAGATACGGATTATTAACG > 1:12169512/1‑67 GGCACTTCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:23180047/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTTGGCACTCGAAGATACGGATTCTTAACGTC < 1:19823301/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCG < 1:28666318/68‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:7353476/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:10835089/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:7393456/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:11621440/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:8046793/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:816259/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC > 1:3781940/1‑67 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:36986378/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:36263703/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:18238086/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC > 1:30448448/1‑67 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:30318685/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:10184034/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC > 1:12325586/1‑67 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:28070603/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:27691140/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC > 1:26890792/1‑67 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:26756831/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:23455727/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:209728/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:19815424/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:1969155/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:13895601/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC < 1:1779407/67‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGT < 1:33732058/66‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGT < 1:25935315/66‑1 GGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGT < 1:19561415/66‑1 GGCACTGCTCCTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTC > 1:18075477/1‑67 GGCACTGCACTTAAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGcc < 1:36147491/67‑3 AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4156458‑4156417‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCG > CP009273/4197929‑4197993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |