| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4549741 | 282 (0.630) | 6 (0.010) | 5/110 | NT | 1.8% | coding (77/462 nt) | yjiG | SpmB family inner membrane protein |
| ? | CP009273 | = 4549764 | 387 (0.890) | coding (54/462 nt) | yjiG | SpmB family inner membrane protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4549674‑4549741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTGTCATCATTCAG < CP009273/4549764‑4549698 GAGCAGGCCGGTAATTTTCAGCGCGTGAATGATGACAAACGCTATCACCACGTTTGGCAGCAGGTTGG > 1:34320607/1‑68GAGCAGGCCGGGAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGG > 1:8406318/1‑68 GCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGGg < 1:27556520/67‑2 AACGCCATCACCACGTTTGGCAGCAGGTTGGCCGTGGCTTTACTATCGCCGCGACCGACCTGCTGCCA > 1:4302900/1‑68 ACCACGTTTGGCAGCAGGTTGGTCGTGGCTTTACTATCGCCCCGACCAACCTGCTGCCAAACGTGGTG > 1:19641785/1‑68 CGTTTGGCAGCAGGTTGGCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATG > 1:35018880/1‑67 CAGCAGGTTGGCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTG > 1:12606008/1‑67 CAGCAGGTTGGCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTG > 1:9099359/1‑67 GCAGGTTGGCCGTGGCTTTACTATCGCCACGCCCAACCTGCTGCCAAACGTGGTGCTGGCGTTTGTCA > 1:21225795/1‑68 GCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTGTCATCATTCAG > 1:1234036/1‑68 GCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTGTCATCATTCAG > 1:16591489/1‑68 GCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTGTCATCATTCAG > 1:32894474/1‑68 GCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTGTCATCATTCAG > 1:3702161/1‑68 GAGCAGGCCGGTAATTTTCAGCGCCTGAATGATGACAAACGCCATCACCACGTTTGGCAGCAGGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4549674‑4549741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTGTCATCATTCAG < CP009273/4549764‑4549698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |