| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1238033 = | 1054 (2.370) | 37 (0.120) | 22/76 | NT | 6.0% | coding (504/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
| ? | CP009273 | 1238051 = | 443 (1.470) | coding (486/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A | |||||
Only 100 of 312 total aligned reads displayed.
CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1238117‑1238033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgacatgtcgggccTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > CP009273/1238051‑1238117 CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAG < 1:8808062/68‑1CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAG < 1:32798497/68‑1 TTTACCGCGCACCATTTCTGGCTGGCGTTACGCAATGAAACGTTCACCATTGAATGGCAAGGGGAAGG < 1:9421894/68‑1 TTTACCGAGCCCCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCGAGGGGAAGG < 1:11358849/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACTCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:12698646/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:24198083/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:29989552/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:2656839/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAG > 1:31982165/1‑67 TTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC < 1:31572637/68‑1 TACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC > 1:24290357/1‑67 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGGAGGCCC > 1:16254191/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:19590462/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:6767594/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG > 1:30697613/1‑65 CCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:25830983/1‑68 CCGAGCACCATTTCTGGCGGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG < 1:10229459/68‑1 CGAGCACCATTTCTGGCTGGCGTTTCGCCAAGAAACCTTGACCATTGAATGGCAAGGGGGAGGCggg > 1:5138322/1‑64 CGAGCACCATTTCTGGCTGGCGTTTCGCAATGAAACCATGACCATTGAATGGCAAGGGGAAGGCCCG > 1:159183/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGA < 1:17277015/68‑1 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:34026629/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:28958633/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:22926926/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:36661613/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:18995753/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:14801832/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:6459019/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:17912144/1‑67 GCACCATTTCTGGCTGGCGTTACGCAATTAAAACATAACCATTGAATTGCAAGGGGAAGGCCCGACAT > 1:37017216/1‑68 GCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT > 1:10128764/1‑68 GCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT > 1:21650635/1‑68 GCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT > 1:29139785/1‑68 GCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT > 1:26962044/1‑68 actATTTCTGGCTGGCGCTACGCAATGAAACCCTCACCATTGAATGGCAAGGGGAAGGCCCGACATG < 1:34690154/64‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGT < 1:21523384/68‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG > 1:5350613/1‑67 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG > 1:11684535/1‑67 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG > 1:32662787/1‑67 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG < 1:23284789/67‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG < 1:35730583/67‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT < 1:35639583/66‑1 TTTCTGGCTGGCGTTACGCAATGAACCCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGG < 1:25977370/68‑1 TTTCTGGCTGGCGTTACGCAATGAAACCTTCCCGATTGAATGGCAAGGGGAAGGCCCGACAGGTCGG > 1:24009141/1‑67 TTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGG < 1:4478133/68‑1 TTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGG < 1:2677898/68‑1 TTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGG < 1:36341416/68‑1 TTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGC < 1:11975567/68‑1 TGGCTGGCGTTACGCAATGAAACCTTCACCATTGCATGGCAAGGGGCCGGCCCGAGATGTCGGGCCT > 1:7287541/1‑67 CTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCC < 1:26225074/67‑1 CTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCC < 1:6143769/67‑1 ACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCAT < 1:2483802/68‑1 ACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCAT < 1:30278642/68‑1 GCAATGAAACCTTCACCATTGAATTGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCGTGCCATTC > 1:18133626/1‑68 AACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGT < 1:13762224/67‑1 CCTTCACCATTGAATGGCAAGGGGCAGGCCCGACATGTCGGGCCTGCCCCTTGCCATTCAATGGTGAA > 1:16991771/1‑68 caTCACCAATGACTGGCAAGGGGAAGGCCCGACAAGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAG < 1:17592515/66‑1 CTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCAGTCAATGGTGAAG > 1:27142470/1‑68 CTTCACCATTCAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAG < 1:35026159/68‑1 CCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTC < 1:33447983/68‑1 CCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTC < 1:9663599/68‑1 GCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAC > 1:35229676/1‑68 AAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACG > 1:21145644/1‑67 AAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACG > 1:20433990/1‑67 GGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAG > 1:4113440/1‑67 AGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCA < 1:15248368/67‑1 GGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA < 1:34484314/68‑1 CCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAA > 1:718279/1‑68 ACATGTGGGGCCTTCCCCTTGCCTTTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGTAATGGT < 1:32208900/68‑1 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:30428692/1‑68 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:27666823/1‑68 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:7020882/1‑68 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:8545152/1‑68 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:32076348/1‑68 CATGTCGGGCCTTCCCCTTGCCTTTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTG > 1:5610867/1‑68 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:36219496/67‑1 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:22071561/67‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:28070668/1‑66 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:29723591/1‑66 TCGGGCAATCCCCTTGCCAATCAATGGTGAAGGTTTCATTGCGTAACTCCAGCCAGAAATGGTGCTCc > 1:22203573/1‑67 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGG > 1:10052035/1‑68 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGG > 1:27969064/1‑68 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:12135826/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:12869552/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:18553777/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:6079190/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:28520197/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:36907791/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:13330332/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:762186/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGGTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:32952192/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTCAAGGTTTCATTGCGTAACGCCAGCCAGAAACGGTGCTCG < 1:34786080/67‑1 CGGGCCTGCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:8130105/67‑1 ggcCCTACCCGTTGCAATTCAATGGTGAAGTTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT < 1:29408443/65‑1 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT < 1:23672822/68‑1 GCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAA > 1:14315479/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:32918820/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:21059603/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:25164874/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:31881501/1‑68 CTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > 1:15593493/1‑68 CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1238117‑1238033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgacatgtcgggccTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > CP009273/1238051‑1238117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |