| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2845465 = | 260 (0.580) | 23 (0.060) | 11/96 | NT | 8.3% | coding (243/273 nt) | hypC | hydrogenase maturation protein |
| ? | CP009273 | 2845525 = | 285 (0.750) | coding (31/1122 nt) | hypD | hydrogenase maturation protein | |||||
TGCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2845538‑2845465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGA > CP009273/2845525‑2845589 TGCATCACCTGTTCCG‑‑GCGCGCGATATTCATCGGCAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:36102422/1‑68TGCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:10900576/1‑68TGCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:7990795/1‑68 GCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:26726264/1‑67 GCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:30235735/1‑67 GCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:32093001/1‑67 GCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:27953800/1‑67 GCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:848608/1‑67 GCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:27838617/1‑67 GCATCACCTGTGCCG‑‑GCGCGCGATAATCATCAACAACCCGCATTATTTTTCCTCGCCATACAACAGCG < 1:35423539/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:6136164/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:18510930/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:18471461/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:23891903/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:8046854/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:29138356/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:30254790/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:9249925/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:10797959/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:31172718/68‑1 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:18770517/1‑67 ATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:36981265/1‑67 TCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:26408283/68‑1 TCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:30313728/68‑1 TCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:3572302/68‑1 TCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:7924691/68‑1 TCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:9397008/68‑1 CACCTGTTCCGGCGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:36714544/68‑1 CACCTGTTCCG‑‑GCGCGCGTTATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:15651756/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:36732126/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:23867977/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:10028012/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:12785191/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:7123951/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:16415267/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:7166582/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:17203281/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:6280419/68‑1 CACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTATTCCTCGCCATACAACAGCGCGCC < 1:17023920/68‑1 ACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCTTTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:11610290/1‑68 ACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:2643669/1‑68 ACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG < 1:31188121/68‑1 ACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:24913013/1‑68 ACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG < 1:5745946/68‑1 ACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG < 1:36884479/68‑1 ACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:22249355/1‑68 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:1503561/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:12442700/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:134041/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:7949609/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:32317169/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:16462893/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:34112650/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:16920503/68‑1 CCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:23608879/68‑1 CTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:18413101/68‑1 TGTTCCG‑‑GCGCGCGATATTCATAAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:11399446/66‑1 gCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:27907292/67‑1 TCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACA < 1:31278123/67‑1 TCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACA < 1:35545675/67‑1 CCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGG < 1:17113646/68‑1 G‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTG > 1:1715003/1‑68 GATATTCCTCAACAAAACGCATTATTTTACCTCGCCAGCCACCAGCGCGCCGGAACAGGTGATGCAG < 1:28398684/67‑1 GATATTCATCAACAACACGCATTATTTTTCCTCGCCATACAACAGCCCGCCGGAACAGGTGATGCAGT < 1:10137410/68‑1 GATATTCATCAACAAAACTCATTATTTTTCCTCCCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:4247014/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:28342018/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:19748550/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:22596716/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:22640855/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:24610486/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:25748264/67‑1 TATTCATCACCAAAACGCATTATTTTTCCTCGCCATACCCCCGCGCGCCGGAACAGGTGATGCAGTT < 1:14120646/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACACCCGCGCGCCGGAACAGGTGATGCAGTT < 1:19398781/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACCGCGCGCCGGAACAGGTGATGCAGTT < 1:7636682/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTA < 1:17056933/68‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:20289394/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:37169863/67‑1 TCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATT < 1:17745466/68‑1 ATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGA < 1:18155618/68‑1 ATCAACAAAACGCATTATTTTTCCTCGCCATACAACACCGCGCCGGAACAGGTGATGCAGTTAATTGA < 1:34150952/68‑1 ATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGT < 1:36467836/68‑1 CTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCAC < 1:7511630/68‑1 GCGCGCCGGATCAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGGGCTTCACATCTCTCTTACACC > 1:21627255/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:1749746/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:31523301/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:19948073/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:26508235/1‑68 GCGCGCCGGAACAGGGGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:426439/1‑68 CGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:11460012/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:35472000/68‑1 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:13991512/68‑1 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:13951936/68‑1 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:19540818/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:35759512/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:23502993/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:10782129/1‑67 GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCC < 1:27688515/67‑1 CCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGA > 1:26920586/1‑68 CGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGA < 1:8396868/67‑1 TGCATCACCTGTTCCG‑‑GCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2845538‑2845465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGA > CP009273/2845525‑2845589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |