| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3202855 = | NA (NA) | 8 (0.020) | 3/94 | NT | NA | intergenic (+9/+34) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein |
| ? | CP009273 | 3202881 = | NA (NA) | intergenic (+35/+8) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein | |||||
GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3202930‑3202855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > CP009273/3202881‑3202946 ggGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:6176827/66‑1ggGCGTCCGCGCTGGCCGCGGGCGGAGTTACCGGCTGCGTAAAACTATTGGGCGCCGGAGAGCAATTT < 1:20088507/66‑1gaGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTAATGGGTGCCGGAGAGCAATTT < 1:23657560/66‑1GTGCGTCGGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:24150242/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:29437447/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:22718286/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:24053857/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:25728365/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:27342726/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:27826400/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:28128523/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:28555882/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:29169648/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:28658247/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:30971006/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:32976729/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:33366841/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:3421053/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:3555267/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:6844278/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:7080378/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:90035/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:9362761/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:21767146/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:18596271/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:12143363/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:19589029/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:12449960/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:16027771/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:19828031/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:19928157/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTAATGGGTGCCGGAGAGCAATTT < 1:16812979/68‑1GTGCGTCCGCGCGGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGAGCCGGAGAGCAATTT < 1:4940562/68‑1GTGCGTCCGCGCCGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:12343745/68‑1 TGCGTCCGCGCTGGCCGCTGGCGGAGTTAGCGGCTGCGTAAAACTATTGGGTGGCGGAGAGCAATTT > 1:36100826/1‑67 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:24299284/1‑67 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:34031248/1‑67 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:5097722/1‑67 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:24144711/1‑67 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:34819905/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:20851610/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:35441310/1‑68 GTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGG < 1:14693592/68‑1 GTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:34310251/1‑67 GTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:17765401/1‑67 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAACCTATTGGGTGCCGGAGCGCAATTTCCGGC > 1:34837342/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:36211182/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:16706412/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:12138808/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:23748838/1‑68 CCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC < 1:36730692/67‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:33043822/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:4811046/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:24987697/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:25081360/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:26944471/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:29487066/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:16035889/68‑1 CGCGCGGGCCGCGGGCGGAGTTACCGGCTGCGTAAAACTATTGGGAGCCGGAGAGCAATTTCCGGCAC < 1:2634595/68‑1 GCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC < 1:21427752/68‑1 GCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCA < 1:27817084/68‑1 GCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCA < 1:34139702/68‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGCGAGCAATTTCCGGCACCCAATAGT < 1:34316877/67‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:5590920/67‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:27212238/67‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:26979489/67‑1 gtaACCGGCTGCGTAAAACTATTGGGTGCCGGAGACCAATTCCCGGCACCCAATAGTTTTACGCAGC < 1:7392004/64‑1 TACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGTTTTACGCAGCCG < 1:8957864/67‑1 TACCGGCTGCGTAAAACTATTGGGGGCCGGAGAGCAATTTCCGCCACCCAATAGTTTTACGCAGCCG < 1:5798312/67‑1 CCGGCGGCGTAAAACTATGGGGGGCCGGAGAGCAATTGCCGGCACCCAATAGTTTTACGCAGCCGGTA < 1:15999947/68‑1 gCCGGCACCCAATCGTTGTCCGCAGCCGGGAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGC < 1:1098131/66‑1 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:8037840/68‑1 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:20846616/68‑1 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG < 1:1199569/68‑1 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:21865196/1‑68 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:3494331/1‑68 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:2925192/1‑68 GCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGA > 1:31232084/1‑68 CACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGA > 1:13617744/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCCCGCTAACGCCGAGAT > 1:13109207/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCCCGCTAACGCCGAGAT > 1:29885599/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGct > 1:36735519/1‑65 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT < 1:5705705/67‑1 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:32147786/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:7025159/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:28898613/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:7743058/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT < 1:7902673/67‑1 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:26330136/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:8560164/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:26146934/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:2322833/1‑67 CCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACTCACGCTAACGCCGAGATCC > 1:29406292/1‑67 CCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > 1:32610871/1‑67 CCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > 1:4698255/1‑67 GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3202930‑3202855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > CP009273/3202881‑3202946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |