| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4034087 | 0 (0.000) | 55 (0.150) | 9/94 | NT | 100% | intergenic (+91/+179) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | CP009273 | = 4034092 | NA (NA) | intergenic (+96/+174) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B | |||||
Only 100 of 424 total aligned reads displayed.
GGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATA > CP009273/4034020‑4034151 | ggAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC < 1:30242998‑M1/68‑1 (MQ=255) ccTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCtcccggcgga < 1:7562840‑M1/67‑11 (MQ=255) tgttgtTTGTCGGTGAACGCGCTCCTGAGTAGGACAAATCCGCtcccggcggatttgtcctactcagg < 1:27014654‑M1/68‑26 (MQ=255) gCTCTCCTGAGTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaa > 1:18186894‑M1/1‑25 (MQ=255) gTAGGACAAATCCGCtcccggcggtgttgtcctactcaggagagcgttccccgacaaacaacagataa > 1:25002701‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttccccgacaaacaacagataa > 1:22513610‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacacacaacagataa > 1:6251401‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataa > 1:16532535‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataa > 1:7911497‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataa > 1:28775353‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataa > 1:12926163‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataa > 1:5965763‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataa > 1:21058349‑M1/1‑15 (MQ=255) gTAGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataa > 1:2207514‑M1/1‑15 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaa > 1:12451780‑M1/1‑13 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaa > 1:13895557‑M1/1‑13 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaa > 1:29662706‑M1/1‑13 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaa > 1:22924651‑M1/1‑13 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaa > 1:28228051‑M1/1‑13 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaa > 1:8528784‑M1/1‑13 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaa > 1:33534362‑M1/1‑13 (MQ=255) aGGACAAATCCGCtcccggcggatttgtcctacgcaggagcgcgttcaccgacaaacaacagataaa > 1:34078346‑M1/1‑13 (MQ=255) aCAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacga > 1:24712243‑M1/1‑10 (MQ=255) aCAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacaaataaaacga > 1:30985780‑M1/1‑10 (MQ=255) aaaTCCGCtcccggcggatttggcctactcaggtgagcgttcaccgacaaacaacagataaaacgaaa < 1:21841079‑M1/68‑61 (MQ=255) tatCCGCtcccggcttatttgtcatactcaggagagcgttcaccgacaaacaacagataaaacgaaag < 1:20254990‑M1/67‑62 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgccaaacaacagataaaacgaaag > 1:392161‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:11342142‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:22710702‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:5543170‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:11647668‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:4775101‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:30714544‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:1747857‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:10557007‑M1/1‑7 (MQ=255) aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:15098985‑M1/1‑7 (MQ=255) atacgctcccggcggatttgtcctactcaggagtgcgttcaccgacaaacaacagataaaacgaaagg < 1:35803210‑M1/65‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:26303647‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:20765528‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:34902433‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:23178139‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:2451281‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:36507928‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:10013375‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:11432394‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:16973083‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:12030901‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:16267727‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:16043427‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:14240233‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:14915998‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg < 1:14670430‑M1/68‑63 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:31144453‑M1/1‑6 (MQ=255) aTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaag > 1:13342301‑M1/1‑6 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttccccgacacacaacagataaaacgaaagg > 1:32268824‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:27426466‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:33194917‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:12676363‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:29321564‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:5271840‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:37132821‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:25541166‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:6702011‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:6473359‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:18536179‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc < 1:1878885‑M1/68‑64 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:7051245‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:36297767‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:8171984‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:35215415‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:34421369‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:5762763‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:9091407‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:9660416‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:20579874‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:10176868‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:10254729‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:10905009‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:13993060‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:14487394‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:1550174‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:15774162‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:16897454‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:17215867‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:1782187‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:19485109‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:19893554‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:21662249‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:23516400‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:23724549‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:25597960‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:259579‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:2668015‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:26797454‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:30027920‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:31613684‑M1/1‑5 (MQ=255) tCCGCtcccggcggatttgacctactcaggagagcgttcaccgacaaacaacagataaaacgaaagg > 1:32027057‑M1/1‑5 (MQ=255) ccGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcc < 1:33950914‑M1/68‑65 (MQ=255) ccGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc > 1:34751488‑M1/1‑4 (MQ=255) ccGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggc > 1:34531005‑M1/1‑4 (MQ=255) | GGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATA > CP009273/4034020‑4034151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |