| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 394482 | NA (NA) | 8 (0.020) | 5/98 | NT | NA | coding (308/309 nt) | yaiY | DUF2755 family inner membrane protein |
| ? | CP009273 | = 394503 | NA (NA) | coding (287/309 nt) | yaiY | DUF2755 family inner membrane protein | |||||
Only 100 of 538 total aligned reads displayed.
ACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAA > CP009273/394416‑394549 | aCAGTGATCAACCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:30160197/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:22184397/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:36075435/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:20507731/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:433015/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:4086835/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:5435880/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:34118805/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:33291330/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:31068185/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:8779923/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:22796949/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:13319309/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:31768177/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCCTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:31580967/1‑67 (MQ=255)aCAGAGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:30614465/1‑67 (MQ=255) aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCCGGCCGCATCTGACAATGTAAAACtt > 1:21749684/1‑65 (MQ=255) aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGATAATGTAAAACtt > 1:34307349/1‑65 (MQ=255) aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:9194481/1‑65 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc > 1:11103902‑M1/1‑62 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc > 1:4973321‑M1/1‑62 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc > 1:8281735‑M1/1‑62 (MQ=255) tCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg > 1:12062521‑M1/1‑60 (MQ=255) tCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg > 1:35157111‑M1/1‑60 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa < 1:2670964/68‑1 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa > 1:19110937/1‑68 (MQ=255) cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg > 1:22596233/1‑68 (MQ=255) cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg > 1:18065244/1‑68 (MQ=255) cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg > 1:18272595/1‑68 (MQ=255) cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg > 1:32216229/1‑68 (MQ=255) ggAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACTATGTAAAACTTACTGGCGGCGATGTC < 1:17816491‑M2/68‑1 (MQ=255) ggAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTC < 1:5256050‑M2/68‑1 (MQ=255) ggAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTC < 1:19853445‑M2/68‑1 (MQ=255) tGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCA < 1:28115987‑M2/68‑1 (MQ=255) gTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAG < 1:2929638‑M2/68‑1 (MQ=255) gTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAG < 1:10890063‑M2/68‑1 (MQ=255) tCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:1553513‑M2/68‑1 (MQ=255) tCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:23893834‑M2/68‑1 (MQ=255) catgCCAGATAAGTCGTTTCAGGCCGCATCTGACAATGTAAAACTTAGTGGCCGCGAAGTCGCCAGt < 1:11824116/64‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:36428071‑M2/67‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:10668767‑M2/67‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:7635582‑M2/67‑1 (MQ=255) ggCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAAATTACTGGCCGCGATGTCGCCAGTGCa > 1:36753434/1‑68 (MQ=255) gCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCa > 1:6257567/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTaagt > 1:20117862‑M2/1‑63 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:4723201/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:32831905/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:17182194/1‑67 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:9384762/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:19027743/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:27511179/67‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa > 1:21060866/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa > 1:3841512/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:28677628/68‑1 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg < 1:3199612/68‑1 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:17471528/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:14506461/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:13561336/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:24797484/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:32673396/1‑68 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:27229955/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:8510688/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:12767441/1‑67 (MQ=255) cGTTTCAGGCATCATCTGAAAATGTAAAACTTACTGGCGGCGATGTAGCCAGTGCATCCATAGCGcc > 1:14307118/1‑67 (MQ=255) ttCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccacc < 1:9690960/67‑1 (MQ=255) catgCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:27946835/65‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:13841453/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:11542598/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:25529454/68‑1 (MQ=255) gCCGCATCTGACAATGTAAAACTTactggcgacatcgccgccagtaagttttacattgtcagatgcg > 1:33484217‑M1/1‑24 (MQ=255) gCCGCATCTGACAATGTAAAACTTactggcgacatcgccgccagtaagttttacattgtcagatgcg > 1:34707225‑M1/1‑24 (MQ=255) gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCa > 1:10374258/1‑68 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGc < 1:15317169/66‑1 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaa > 1:12443165/1‑68 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaa > 1:5830251/1‑68 (MQ=255) gCATCTGACAATGTAAAACTTACTGGGGGCGATGTCGCCAGTGCAGCCATAGCGGCACCACTGCaata < 1:21545286/68‑3 (MQ=255) aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc > 1:15463609/1‑68 (MQ=255) cAATGTCAAACTTACTGGCGGCGAGGGCCCCAGTatgttttacattgtcagatgcggcctgaaacgc > 1:28219535‑M2/1‑34 (MQ=255) cAATGTAAAACTTactggcgacatcgccgccagtaagttttacattgtcagatgcggcctgaaacg > 1:20685909‑M1/1‑13 (MQ=255) cAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:3535792/1‑68 (MQ=255) cAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:13125704/1‑68 (MQ=255) aaTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:25188281/1‑67 (MQ=255) aaTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:6533016/1‑67 (MQ=255) aTGTAAACCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:24353041/68‑1 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:14945351/68‑1 (MQ=255) tAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCct > 1:33692407/1‑67 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:8009113/68‑1 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:3036640/68‑1 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGGCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:29916878/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCATAAATGAGGCAGCCTACTaa > 1:34913494/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:6629844/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:7179081/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:16220728/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:18644744/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:19533175/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:23166353/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:1690194/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:35861077/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:26050245/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:9624202/1‑68 (MQ=255) | ACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAA > CP009273/394416‑394549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |