| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 711204 | 248 (0.560) | 20 (0.050) | 8/104 | NT | 8.4% | coding (337/495 nt) | ybfP | lipoprotein |
| ? | CP009273 | = 711218 | 204 (0.490) | coding (351/495 nt) | ybfP | lipoprotein | |||||
Only 100 of 403 total aligned reads displayed.
TATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGATTTTT > CP009273/711137‑711271 | tatGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGG < 1:31002566‑M1/68‑1 (MQ=255)tatGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGG < 1:25398929‑M1/68‑1 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGt > 1:23974738/1‑68 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGt > 1:36404641/1‑68 (MQ=255) tGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGtt > 1:26477034/1‑68 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:11194408/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:15517190/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:35838175/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:3077886/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:10480129/1‑67 (MQ=255) cAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTg < 1:35636955/67‑1 (MQ=255) cAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTg < 1:36510514/67‑1 (MQ=255) aGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACAGCTCATTTTTTATGCGGGTTTGcc > 1:34144918/1‑68 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg < 1:8582913/68‑1 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg < 1:12184504/68‑1 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg < 1:22771869/68‑1 (MQ=255) caAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAggg < 1:7163096/68‑1 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:16897739/1‑67 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:35254585/1‑67 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:5909342/1‑67 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:12549390/1‑67 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:26058125/1‑67 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:24944370/1‑67 (MQ=255) aaaaCGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:30185877/1‑67 (MQ=255) aaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcc > 1:25098971‑M2/1‑66 (MQ=255) aaGCTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcc > 1:22895218‑M2/1‑66 (MQ=255) aGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGccc < 1:25191751‑M2/68‑4 (MQ=255) gTCGGTTTAGATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccg < 1:26969422‑M2/67‑5 (MQ=255) gTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccg < 1:13912741‑M2/67‑5 (MQ=255) gTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccg < 1:23545381‑M2/67‑5 (MQ=255) gTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccg < 1:27128725‑M2/67‑5 (MQ=255) gTCGGTTTAAATCCCGGTTGGCAATGATAAACCTCATATTTTATGCGGGTTTGACAGGGCAAGcccc < 1:33104720‑M2/67‑5 (MQ=255) cGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGc < 1:6341955/67‑1 (MQ=255) ttAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccgcataaaa > 1:9571819‑M2/1‑57 (MQ=255) ttAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCg > 1:15843997/1‑68 (MQ=255) tAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccgcataaaaa > 1:13572354‑M2/1‑56 (MQ=255) tAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGa < 1:34825190/68‑1 (MQ=255) tAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGa < 1:28026097/68‑1 (MQ=255) tAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGa < 1:28770966/68‑1 (MQ=255) tAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGa < 1:3853617/68‑1 (MQ=255) tAAATCCCGGTGGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGa < 1:29411410/68‑1 (MQ=255) aaaTCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGAc < 1:21590111/68‑1 (MQ=255) aaaTCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGAc < 1:14346667/68‑1 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:7421311/1‑68 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:8220156/1‑68 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa < 1:9232094/68‑1 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:26283009/1‑68 (MQ=255) cccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGAt < 1:12938051/68‑1 (MQ=255) cccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGAt < 1:10601948/68‑1 (MQ=255) cccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGAt < 1:17162840/68‑1 (MQ=255) cccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTGTGCCAGGGCAAGcccgcataaaaaatgag > 1:18533407‑M2/1‑51 (MQ=255) ccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccgcataaaaaatgagg > 1:8784458‑M2/1‑50 (MQ=255) ccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATa < 1:20780388/68‑1 (MQ=255) cGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAg < 1:19195704/68‑1 (MQ=255) cGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAg < 1:7557487/68‑1 (MQ=255) ggTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGt < 1:29129848/68‑1 (MQ=255) ggTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGt < 1:3279224/68‑1 (MQ=255) ggTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGt < 1:34706611/68‑1 (MQ=255) ggTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGt < 1:4810348/68‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTc < 1:18031355/67‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTc < 1:32198613/67‑1 (MQ=255) tGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCaa > 1:8060148/1‑68 (MQ=255) tGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCaa < 1:24269930/68‑1 (MQ=255) aaTGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAg < 1:27695645/68‑1 (MQ=255) aaTGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAg < 1:23428000/68‑1 (MQ=255) aTGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAgg > 1:33533087/1‑68 (MQ=255) aTGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAgg < 1:16246659/68‑1 (MQ=255) aTGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAgg < 1:31678227/68‑1 (MQ=255) aTGCTACACCTCATTTTATCTGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAgg < 1:31464495/68‑1 (MQ=255) ttcTACACCTCATTTTTTATGCGGGTTTGCCAGGGCATGCCCGGCACTCGACCGATAGTCAATGAggt < 1:22650632/66‑2 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCGAGGGGAAGCCCGGCTCTCGACCGATAGTCAATGAGGa < 1:432206/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:2958564/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:11646603/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:10042270/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:13111065/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:5350958/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:14528270/68‑1 (MQ=255) gCTACACCTCATTTTTTATGCGGGattgccctggcaaacccgcataaaaaatgagttgtagcttttcc > 1:33345770‑M1/1‑24 (MQ=255) gCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGAt > 1:6683907/1‑68 (MQ=255) gCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGAt > 1:28379097/1‑68 (MQ=255) cTACACCTCATTTTTTATGCGGGcttgccctggctaacccgcataaaaaatgaggtgtagcattgcca > 1:24160023‑M1/1‑23 (MQ=255) acacCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTAt > 1:16073898/1‑68 (MQ=255) acCTCATTTTTTATGCGGGcttgccctggcaaacccgcataaaaaatgaggtgtaggattgccaaccg > 1:10318876‑M1/1‑19 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg > 1:22996020/1‑67 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg > 1:15178125/1‑67 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg > 1:22139303/1‑67 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg > 1:20208228/1‑67 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGt < 1:24644715/68‑1 (MQ=255) ccTCATTTTTTATGCGGGcttgccctggcaaccccgcattaaaaatgaggtgtggcatggccacccgg > 1:5755774‑M1/1‑18 (MQ=255) ccTCATTTTTTATGCGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgg > 1:1388527‑M1/1‑18 (MQ=255) ccTCATTTTTTATGCGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgg > 1:30727457‑M1/1‑18 (MQ=255) ccTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTc > 1:1276780/1‑68 (MQ=255) cTCATTTTTTATGCGGGcttgccctggcaatcccgcataaaaaatgaggtgtagcattgccaaccggg > 1:9433808‑M1/1‑17 (MQ=255) cTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCa < 1:14747537/68‑1 (MQ=255) tCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCa > 1:21311870/1‑67 (MQ=255) tttttATGCGGGcttgccctggcaaccccgcataaaaaatgaggtgtagcattgccaaccgggattta > 1:18354570‑M1/1‑12 (MQ=255) tATGCGGGTTTGCCAGGGCACGCCCGGCACTCGCCCGATAGTCAATGATGATTATGTCAGCGAAAGCg < 1:5049155/68‑1 (MQ=255) cGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgac < 1:10879693‑M1/67‑64 (MQ=255) gcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgaccttt > 1:34551132‑M1/1‑1 (MQ=255) gcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgaccttt > 1:15007584‑M1/1‑1 (MQ=255) | TATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGATTTTT > CP009273/711137‑711271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |