| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1586885 = | NA (NA) | 4 (0.010) | 4/90 | NT | NA | intergenic (‑186/+37) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog |
| ? | CP009273 | 1586916 = | NA (NA) | intergenic (‑217/+6) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog | |||||
Only 100 of 510 total aligned reads displayed.
TCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCC > CP009273/1586818‑1586952 | actaggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtat < 1:25082154‑M1/1‑1 (MQ=255)actaggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtat < 1:16919017‑M1/1‑1 (MQ=255) taggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTaa < 1:6001558‑M1/3‑1 (MQ=255) aggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAg > 1:36529725‑M1/65‑68 (MQ=255) aggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAg > 1:1735672‑M1/65‑68 (MQ=255) gtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGcc < 1:4013087‑M1/6‑1 (MQ=255) gATCGCGGATAAAAAGGAGGATTTAAATAAGCCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:14076337/68‑1 (MQ=255) tgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGc > 1:426570‑M1/62‑66 (MQ=255) tgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGc > 1:26945869‑M1/62‑66 (MQ=255) tgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGc > 1:20370758‑M1/62‑66 (MQ=255) aTCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc > 1:4599091/1‑67 (MQ=255) aTCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc > 1:27084889/1‑67 (MQ=255) tCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGc < 1:9527619/68‑1 (MQ=255) taaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCa > 1:27278569‑M1/59‑67 (MQ=255) tAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCAt < 1:15714130/68‑1 (MQ=255) aaaaGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCAtct < 1:10416350/68‑1 (MQ=255) aaaGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCAtctc < 1:7387338/68‑1 (MQ=255) aggaggATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCg > 1:22339779/1‑67 (MQ=255) aggaggATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGa < 1:32032619/68‑1 (MQ=255) aggaggATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGa < 1:27934713/68‑1 (MQ=255) ggaggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGAc > 1:33877931/1‑68 (MQ=255) aggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGAc < 1:12640183/66‑1 (MQ=255) aggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACa < 1:22781904/67‑1 (MQ=255) aggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACAt > 1:29660172/1‑68 (MQ=255) tttAAATACGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:20088436/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:9128551/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:15948438/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:33192505/68‑1 (MQ=255) tttAAATAAGGCGGAGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACCTGCgg < 1:30780463/68‑1 (MQ=255) tAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCt < 1:3870429/68‑1 (MQ=255) tAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCt < 1:19679426/68‑1 (MQ=255) tAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCt < 1:28320834/68‑1 (MQ=255) aaaaaaGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:20712620/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:15017323/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:29966499/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:14772127/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:19314210/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:15435068/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:11593558/68‑1 (MQ=255) aaaaaGGCGATGATGCGCAGTATGAAGACGGCAATATTAAGCCGCAAGCCAACTCGACAACAGGCTta > 1:6435492/4‑68 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:37167465/1‑68 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:13689164/1‑68 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:30279685/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat < 1:35021979/68‑1 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat < 1:7615151/68‑1 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:8553346/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:21970038/1‑68 (MQ=255) tAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:32490258/1‑67 (MQ=255) tAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:18959679/1‑67 (MQ=255) aGGCGTTGATGCGCCGTTTGAAGTCGGCAATAATAAGCCGCATGCCATCTCGACATGCGGCTTATACg < 1:11289513/68‑1 (MQ=255) gCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt > 1:12418861/1‑68 (MQ=255) gCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt > 1:3578451/1‑68 (MQ=255) gCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt > 1:36706076/1‑68 (MQ=255) gCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt > 1:21061540/1‑68 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:28794499/67‑1 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:3157758/67‑1 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:23286839/67‑1 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:17720524/67‑1 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:13522932/67‑1 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:24893184/67‑1 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:18482597/67‑1 (MQ=255) gTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGtt < 1:16176822/67‑1 (MQ=255) tgtgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAg < 1:34742995/65‑1 (MQ=255) tGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCa < 1:13915813/67‑1 (MQ=255) tGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAg < 1:5844952/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCa > 1:24499973/1‑66 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:539927/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:2306826/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:36896351/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:34205385/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:33444099/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:89660/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:28609214/68‑1 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCta > 1:5120466/1‑68 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCt < 1:10086083/67‑1 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCt < 1:16565465/67‑1 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCt < 1:22199579/67‑1 (MQ=255) gcCGTTAGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCta > 1:18620842/1‑68 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtat < 1:29134278/67‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTAAACGGTTTACCAGCtat < 1:17022127/67‑1 (MQ=255) cGTTTCAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtata > 1:25404954/1‑68 (MQ=255) atatagctggtaaaccgtaTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtata < 1:27664238‑M1/49‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:13147694/68‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:20892661/68‑1 (MQ=255) aaGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTc > 1:32545522/1‑66 (MQ=255) aaGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTc > 1:31292905/1‑66 (MQ=255) aGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCAc < 1:12091098/67‑1 (MQ=255) aGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt < 1:14432608/68‑1 (MQ=255) gTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTAACCAGCTATATTTCACt > 1:7877693/1‑67 (MQ=255) gTCGGCAATATTAAGCCGCATGCCATATCGCCATGCGGCTTATACGGTTTACCAGCTATCTTTCCCt > 1:23759288/1‑67 (MQ=255) cAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAg < 1:34553975/67‑1 (MQ=255) atatTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCAt > 1:6886352/1‑68 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:26001626/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:26729837/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:823447/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:36361249/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:33613510/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:18250590/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:23980417/68‑1 (MQ=255) ttAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGcc < 1:3599037/68‑1 (MQ=255) | TCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCC > CP009273/1586818‑1586952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |