| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 311 (0.700) | 20 (0.050) | 11/92 | NT | 5.6% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 425 (1.160) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 533 total aligned reads displayed.
GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229931‑2230065 | ggAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC > 1:2575277‑M1/1‑68 (MQ=255) agtgaattTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGTGACGCATCCGGCAt < 1:19846542/67‑1 (MQ=255) agtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAt < 1:28294156/67‑1 (MQ=255) gtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAttt > 1:26949016/1‑68 (MQ=255) agtTTAAGAAAGGCGTGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCgacagga < 1:36849283‑M1/67‑8 (MQ=255) agtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGAATTTGGt > 1:1096459/1‑67 (MQ=255) tttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGtt > 1:23700956/1‑66 (MQ=255) ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCt < 1:4723136/68‑1 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:17268245‑M2/67‑2 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:582916‑M2/67‑2 (MQ=255) aaaGGCGAGAAAGAACAACCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:19100161‑M2/67‑2 (MQ=255) ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgg < 1:9686760‑M2/68‑6 (MQ=255) gagaTAGAAAACCCGGTAACGTTGTAAATCAAGAGACGCATACGTCATTTTGTTCCTGTAGCCGGAt < 1:31908701/67‑1 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgg < 1:6306283‑M1/67‑26 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:29745621‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:24653140‑M2/66‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:853385‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:26626629‑M2/66‑11 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:8422593/1‑68 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:33067524/1‑68 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:20160897/1‑68 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:8283928/1‑68 (MQ=255) cacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:31309842/1‑67 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:32038369/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:16942829/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:17862462/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCAACCGGCAGTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:18498194/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg > 1:35628010/1‑67 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:13174405/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:18295558/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:21358991/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:33383115/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:14145504/68‑1 (MQ=255) cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg > 1:30922875/1‑66 (MQ=255) cGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGcc < 1:3814499/68‑1 (MQ=255) ggTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCt < 1:21767564/68‑1 (MQ=255) aaCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTa > 1:19375633/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaac > 1:22594376‑M2/1‑42 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:30729228/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:28873367/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:16516648/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:3707698/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAt > 1:14661354/1‑67 (MQ=255) gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCg > 1:32840922/1‑68 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCgg > 1:36373963/1‑67 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCgg < 1:19179758/67‑1 (MQ=255) tGTAAAACCAGACACGCATCCGGCATTTCGTTCCTGTCGCCGGATGCGGCTTGAACGCCTAATCCGGc < 1:20790650/68‑1 (MQ=21) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCt < 1:2395813/67‑1 (MQ=255) aaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaacgttaccgg > 1:15404226‑M2/1‑34 (MQ=255) aaCCAGAGACGCATCCGGCgacaggacccaaatgccggatgcgtctctggttttacaacgttaccggg > 1:35857103‑M1/1‑19 (MQ=255) aaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACa > 1:35070824/1‑68 (MQ=255) aaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACa > 1:13543034/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:10377757/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:14837834/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:30429848/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaa > 1:34175573/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGTTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:8976256/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:5270496/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:27184591/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:710792/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:7591222/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTAGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:25281518/1‑68 (MQ=255) cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:31617208/1‑67 (MQ=255) gagaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc > 1:3966423/1‑68 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:22230989/66‑1 (MQ=255) aCGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttcttt > 1:33623096‑M1/1‑11 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:15621001/1‑67 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt < 1:7829636‑M1/66‑57 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:21152842‑M1/1‑10 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:33905693‑M1/1‑10 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt < 1:8141789‑M1/66‑57 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt < 1:12210231‑M1/66‑57 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:688153/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:36558717/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:31071476/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:34519175/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:10670326/1‑68 (MQ=255) gCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttct < 1:1959299‑M1/68‑60 (MQ=255) aTCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctc > 1:32436824‑M1/1‑7 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:23231242/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:32274671/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:26164557/68‑1 (MQ=255) tCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcg > 1:11796490‑M1/1‑6 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:10255662/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:11035943/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:11527618/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:12836427/68‑1 (MQ=255) ccGGCATTTGGGTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:5641131/68‑1 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg < 1:15988843/68‑1 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg < 1:12580644/68‑1 (MQ=255) gCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctt > 1:13954978‑M1/1‑2 (MQ=255) gCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctt > 1:9471766‑M1/1‑2 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:11307863‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:1456931‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:20632286‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:24373866‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:28084103‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:27570427‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctt > 1:25177020‑M1/1‑1 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcctt > 1:10117289‑M1/1‑1 (MQ=255) | GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229931‑2230065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |