| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3615349 = | NA (NA) | 6 (0.020) | 4/96 | NT | 100% | coding (2798/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | 3615372 = | 0 (0.000) | coding (2821/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
Only 100 of 288 total aligned reads displayed.
CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGG > CP009273/3615305‑3615440 | ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:10178909‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:9636974‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:7404698‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:5141143‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:36773666‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:35654937‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:32173694‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:29372563‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:22328632‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:13033608‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:10677813‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:11928171‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcaaaccggtaaagatagtgcgc > 1:6508021‑M2/68‑68 (MQ=255)ccttccgggatgaggtcgggtttctctgtcagcctgccgtgacgggcgtaccggtaaagctagtgcgc > 1:30345966‑M2/68‑68 (MQ=255) cttccggtatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:3275999‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:32213384‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:12505266‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:25690286‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:24585090‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:26415109‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:4807358‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:29281976‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:5968120‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:29482425‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:11617322‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:31433704‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:31081740‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:10241910‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:16983139‑M2/2‑1 (MQ=255) cttccgggatgaggtcggtgttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:27093747‑M2/2‑1 (MQ=255) cttccgggatgagggcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:72280‑M2/2‑1 (MQ=255) cttccgggatgagggcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:6143608‑M2/2‑1 (MQ=255) cttccgggatgagggcggttttctcagtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:1861692‑M2/2‑1 (MQ=255) cttccgggatgagggcggatttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:3964229‑M2/2‑1 (MQ=255) cttccgggaggaggtcggttttctctgtccgcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:26754022‑M2/2‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:21511400‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:19578002‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:18144114‑M2/65‑68 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:17666148‑M2/65‑68 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:36420843‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:25823040‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:32914306‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacgctcatacccgtaaagatagtgcgCGTc > 1:27712644‑M2/64‑67 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgtcggtcataccggtaaagatagtgcgCGTCAc > 1:15143774‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgccggtcataccggtaaagatagtgcgCGTCAc > 1:28064980‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccgttaaagatagtgcgCGTCAc > 1:34347884‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:33113935‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:23968105‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:17316907‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:18792677‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataacggtaaagatagtgcgCGTCAc > 1:3861616‑M2/63‑68 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg > 1:24302920‑M2/62‑68 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg > 1:8017633‑M2/62‑68 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg < 1:35846078‑M2/7‑1 (MQ=255) ggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:22707208‑M2/61‑68 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:11225224‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:8363353‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:34191701‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:15614991‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:16110179‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:16553812‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:35596188‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:24911636‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:19051519‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:117863‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:10400404‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:21411969‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:2209149‑M2/60‑67 (MQ=255) tgaggtcgggtttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACGGCa < 1:7799859‑M2/10‑1 (MQ=255) gtttctctgccagcctgcccggacgggcataccggtatagacagtgcgCGTCACGGCAGGCTGACag < 1:28746463‑M2/19‑1 (MQ=255) tttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGGCACGGCAGGCTGACaga < 1:10021646‑M2/20‑1 (MQ=255) cggtaaagatagtgcgCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATcc > 1:28592497‑M2/17‑68 (MQ=255) CGTCACGGCAGGCTGACAGCG‑AAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCgg < 1:25747992‑M2/68‑1 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGCCCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:9095333‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGCCCTCATCCCGGAAGGGGTTATCCGCACGCATGATGAGc > 1:32507574‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGCTGATGAGCg > 1:29587043‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:20045732‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:17774085‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:555877‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:20873155‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:4839603‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:15324008‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:14871981‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:14614551‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:29507270‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:34537505‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:13628929‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:848592‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:6728096‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:12185946‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:19385205‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:20706688‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:5801585‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:4431298‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:23342845‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:24454184‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:36593273‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:30092672‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:30485145‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACATCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:22936457‑M2/1‑68 (MQ=255) | CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGG > CP009273/3615305‑3615440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |