| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4161825 = | NA (NA) | 4 (0.010) | 3/96 | NT | 100% | intergenic (+141/‑160) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | CP009273 | 4161830 = | 0 (0.000) | intergenic (+146/‑155) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding | |||||
AGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161763‑4161897 | aaaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg < 1:13396389‑M2/1‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgctgcctggcagtttatggcgggcgtcctGc < 1:1418143‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:18874976‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:24866820‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:4822571‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:16101523‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:17049187‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:17943448‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:18754186‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:30026082‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:19722725‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:36008429‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:22487308‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:22531948‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:34542117‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:33615745‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:3358334‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:32999817‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:14359734‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:30409326‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:10440508‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:108556‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:6824544‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:5488349‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2497806‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:14015535‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1341976‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:571011‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatatgatgcctggcagtttatggcgggcgtcctGc < 1:1813826‑M2/2‑1 (MQ=255) aaaaggccatccggcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:32409095‑M2/2‑1 (MQ=255) aaaaggccaaccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:12413071‑M2/2‑1 (MQ=255) aaaggccatccgtcaggatggccttctggttaatttgatgcctggcagtttatggcgggcgtcctGc > 1:36935717‑M2/66‑67 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:23897518‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:16797065‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:23036719‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:12859928‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc > 1:24343672‑M2/66‑67 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc > 1:24343686‑M2/66‑67 (MQ=255) aaagcccatccgtccggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:20219904‑M2/3‑1 (MQ=255) tccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATaa < 1:18129271‑M2/11‑1 (MQ=255) tggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGc < 1:21782183‑M2/21‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:2114969‑M2/26‑1 (MQ=255) taatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTAAGc < 1:35698209‑M2/33‑1 (MQ=255) taatttcatccctggcagtttatgccgggcggcctGCCCGCCATAAACTGCCAGGCATCAAATTAAGc < 1:35832779‑M2/33‑1 (MQ=255) tttgatgcctggcagtttatggcgggcgtcctGCCCGc < 1:32570773‑M2/6‑1 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTTAGCAGAAGGCCATCCTGACGGATGGCCTGTTTGCGt > 1:5849738/1‑68 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGATGGCCTTTTTGCGt > 1:7823891/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGATGGCCTGTTTGCGt > 1:11541000/1‑68 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:36338306/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:5105808/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:31673953/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:25775707/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:33046084/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:3433789/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:35750624/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:5729215/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:7452191/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:9218075/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:27793750/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23243652/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:17605621/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:18420877/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:27261601/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:21864602/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23159466/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23180088/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:14591514/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23245045/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:11011870/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:26466656/1‑68 (MQ=33) aCGCCCGCCATAAACAGCCAGGCATCAAATTAAGCAGAAGGCCATCGTGACGGATGTACTTTTTGCGt > 1:24280797/1‑68 (MQ=11) tGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCgtg > 1:23516182‑M2/2‑67 (MQ=255) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGATGGCCTTTTTGCGtt > 1:20771333/1‑68 (MQ=25) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:32499288/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt < 1:509288/68‑1 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:10374469/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:35380016/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:5033865/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt < 1:29908217/68‑1 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:10302744/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:10434215/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:25773264/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCGTTTTGCGtt > 1:22096844/1‑68 (MQ=25) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCATTTTTGCGtg > 1:2144655/1‑67 (MQ=16) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGACCACCCTGACGGATGGCCTTTTTGCGtt < 1:35891129/68‑1 (MQ=255) cgcccgccATAAACTGCCAGGCATCAAATAAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:702698/1‑67 (MQ=16) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:15285907‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:34066393‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:14759396‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:2322398‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:13874459‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:12644220‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:12362572‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:6559690‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25411022‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25555472‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:7496145‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:7510650‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:313396‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:28096839‑M2/68‑3 (MQ=255) | AGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161763‑4161897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |