New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 902734202 (0.450)16 (0.040) 10/98 NT 8.1% coding (1005/1431 nt) ybjT putative NAD‑dependent oxidoreductase
?CP009273 = 902785 186 (0.480)coding (954/1431 nt) ybjT putative NAD‑dependent oxidoreductase

Only 100 of 283 total aligned reads displayed.

AGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCT  >  CP009273/902719‑902851
                                                                  |                                                                  
agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:32656349‑M2/68‑2 (MQ=255)
agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:24317951‑M2/68‑2 (MQ=255)
 gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:3922546‑M2/67‑2 (MQ=255)
 gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:36890500‑M2/67‑2 (MQ=255)
 gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:29933501‑M2/67‑2 (MQ=255)
 gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc                                                                   <  1:26576223‑M2/67‑2 (MQ=255)
  cagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcg                                                                  <  1:20267360‑M2/67‑3 (MQ=255)
      aaGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagc                                                             <  1:15382365‑M2/68‑8 (MQ=255)
      aaGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccag                                                              >  1:1525070‑M2/1‑61 (MQ=255)
      aaGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgcc                                                                >  1:24816207‑M2/1‑61 (MQ=255)
       aGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagcc                                                            >  1:30770878‑M2/1‑60 (MQ=255)
        ggCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg                                                           >  1:35048657/1‑68 (MQ=255)
        ggCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg                                                           >  1:13512480/1‑68 (MQ=255)
          cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagcctt                                                          >  1:6265088‑M2/1‑57 (MQ=255)
          cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCggg                                                          <  1:10308421/67‑1 (MQ=255)
          cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg                                                           <  1:1454532/66‑1 (MQ=255)
           tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc                                                         <  1:23533466/67‑1 (MQ=255)
           tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc                                                         <  1:21418913/67‑1 (MQ=255)
           tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc                                                         <  1:31271907/67‑1 (MQ=255)
           tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc                                                         <  1:33993130/67‑1 (MQ=255)
           tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc                                                         <  1:36660974/67‑1 (MQ=255)
              cGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAg                                                     >  1:33593606/1‑68 (MQ=255)
              cGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAg                                                     >  1:10604237/1‑68 (MQ=255)
               ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgc                                                     >  1:32326689‑M2/1‑52 (MQ=255)
               ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg                                                    <  1:12753908/68‑1 (MQ=255)
               ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg                                                    <  1:34183715/68‑1 (MQ=255)
               ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg                                                    <  1:3975341/68‑1 (MQ=255)
               ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAg                                                     >  1:7757880/1‑67 (MQ=255)
               ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAg                                                     >  1:33848805/1‑67 (MQ=255)
               ggACGTTTAAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgc                                                     >  1:1407671‑M2/1‑52 (MQ=255)
               ggACGTGTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgct                                                    >  1:26029760‑M2/1‑52 (MQ=255)
                  cGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGcc                                                  <  1:7256818/67‑1 (MQ=255)
                  cGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGcc                                                  <  1:22437905/67‑1 (MQ=255)
                  cGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGGcgccagccttgctgcttt                                                  >  1:11448007‑M2/1‑49 (MQ=255)
                   gTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgctttat                                                >  1:33005420‑M2/1‑48 (MQ=255)
                    ttttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGa                                               >  1:33144495/1‑68 (MQ=255)
                     tttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGGcgccagccttgctgctttatgg                                              >  1:28641826‑M2/1‑46 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:9454413/68‑1 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          >  1:8764315/1‑68 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:29395227/68‑1 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:7059594/68‑1 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:16047222/68‑1 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:17931686/68‑1 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:19377526/68‑1 (MQ=255)
                         aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc                                          <  1:22937148/68‑1 (MQ=255)
                          cGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcg                                         <  1:16415320/68‑1 (MQ=255)
                          cGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcg                                         >  1:11190547/1‑68 (MQ=255)
                          cGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcg                                         <  1:29671470/68‑1 (MQ=255)
                           ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt                                        >  1:25622229/1‑68 (MQ=255)
                             tAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTa                                       <  1:14754532/67‑1 (MQ=255)
                              aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGc                                     <  1:6521266/68‑1 (MQ=255)
                              aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGc                                     <  1:36425690/68‑1 (MQ=255)
                              aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGc                                     <  1:285643/68‑1 (MQ=255)
                               aaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgctttatggcaggtagtga                                    >  1:35808660‑M2/1‑36 (MQ=255)
                                aCCCCGCCTCTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGAAGcc                                    >  1:17055341/1‑67 (MQ=255)
                                 ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCTGGCAAAGGCCTGAGCGTCGTAGcccc                                  >  1:12235443/1‑68 (MQ=255)
                                 ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc                                  >  1:3187782/1‑68 (MQ=255)
                                  cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa                                 >  1:9129327/1‑68 (MQ=255)
                                   ccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAg                                >  1:18707917/1‑68 (MQ=255)
                                      ccTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc                              >  1:3066015/1‑67 (MQ=255)
                                       cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg                             <  1:19183838/67‑1 (MQ=255)
                                       cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg                             <  1:25805633/67‑1 (MQ=255)
                                       cTGTTTGGCAAAATAACCGTACTCCGGGCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg                             <  1:29492753/67‑1 (MQ=255)
                                           ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGa                        <  1:4575341/68‑1 (MQ=255)
                                           ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGa                        <  1:10278722/68‑1 (MQ=255)
                                             ggCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGt                      <  1:29992299/68‑1 (MQ=255)
                                                aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTg                    >  1:18194002/1‑67 (MQ=255)
                                                aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTg                    >  1:33210582/1‑67 (MQ=255)
                                                aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGa                   <  1:10790262/68‑1 (MQ=255)
                                                aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGa                   <  1:36197408/68‑1 (MQ=255)
                                                    tAACGGTACTCCGGTCGCCTGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAg               <  1:24219554/68‑1 (MQ=255)
                                                    tAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAg               <  1:1187562/68‑1 (MQ=255)
                                                    aaacCGTACGCCGGGcgccagccttgctgctttatggcaggtagtgaaccaaatcggcggtaaagagc               >  1:23413916‑M2/2‑15 (MQ=255)
                                                     aaCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGt              <  1:17609839/68‑1 (MQ=255)
                                                     aaCCGTACTCCGGGCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGt              <  1:27378932/68‑1 (MQ=255)
                                                      aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt             <  1:31499044/68‑1 (MQ=255)
                                                      aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt             <  1:13258308/68‑1 (MQ=255)
                                                       ccGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGttt            <  1:24162210/68‑1 (MQ=255)
                                                        cGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtttt           >  1:30234235/1‑68 (MQ=255)
                                                         gTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGttttt          <  1:13768107/68‑1 (MQ=255)
                                                           aCTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGttttt          >  1:35213805/1‑66 (MQ=255)
                                                            cTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       <  1:26302344/68‑1 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctc      <  1:5360268/68‑1 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:32023673/1‑67 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:2679974/1‑67 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:22154570/1‑67 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:25351819/1‑67 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:11674769/1‑67 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:35750749/1‑67 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:34923851/1‑67 (MQ=255)
                                                             tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:25196080/1‑67 (MQ=255)
                                                              ccGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct       >  1:15545399/1‑66 (MQ=255)
                                                               cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct    <  1:28188204/68‑1 (MQ=255)
                                                               cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct    <  1:19131152/68‑1 (MQ=255)
                                                                ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctcc     >  1:11067408/1‑66 (MQ=255)
                                                                ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCctcctc   <  1:26665970/68‑1 (MQ=255)
                                                                  tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:17107918/67‑1 (MQ=255)
                                                                  tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:27073763/67‑1 (MQ=255)
                                                                  tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:157669/67‑1 (MQ=255)
                                                                  tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct  <  1:20745976/67‑1 (MQ=255)
                                                                  |                                                                  
AGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCT  >  CP009273/902719‑902851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.