| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1101408 = | 148 (0.330) | 22 (0.060) | 12/94 | NT | 14.4% | coding (133/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit |
| ? | CP009273 | 1101450 = | 137 (0.370) | coding (175/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit | |||||
Only 100 of 392 total aligned reads displayed.
GGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCACA > CP009273/1101383‑1101516 | taacggcatgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcg < 1:6733747‑M2/1‑1 (MQ=255) gCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCg < 1:18163577/67‑1 (MQ=255) gCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGa > 1:9491750/1‑68 (MQ=255) cATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGAtt > 1:30001970/1‑68 (MQ=255) ttCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc < 1:24648904/68‑1 (MQ=255) tCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:22692840/1‑67 (MQ=255) tCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGc > 1:28308549/1‑67 (MQ=255) catgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGc < 1:22409688‑M2/6‑1 (MQ=255) catgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGc < 1:22131712‑M2/6‑1 (MQ=255) cATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGccc < 1:14458691/68‑1 (MQ=255) atgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGccc < 1:36367737‑M2/8‑1 (MQ=255) atgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGccc < 1:12769496‑M2/8‑1 (MQ=255) atgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGccc < 1:7588870‑M2/8‑1 (MQ=255) tgccccgtagggcaatcgccctgctgttgcctgacttttaaacaagcatccagcagggcGATTGCCCt < 1:3677942‑M2/9‑1 (MQ=255) aTCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACCGCAGGGCGATTGCCCt < 1:19736849/68‑1 (MQ=255) aTCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCt < 1:36287388/68‑1 (MQ=255) cgcgCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTAc > 1:21848495/1‑68 (MQ=255) cccgtagggcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACg < 1:3256618‑M1/54‑1 (MQ=255) aGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACgggg < 1:6027962/67‑1 (MQ=255) gggTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:31191646/68‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:3171068‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATg < 1:11688714‑M1/61‑1 (MQ=255) gcaatcGCCCTGCTGGATGCGTGTTTAAAAGTCAGGCAACCGCAGGGCGATTGCCCTACGGGGCATg < 1:23786771‑M1/61‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGcc < 1:13062860/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGcc < 1:34173297/67‑1 (MQ=255) tCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCg > 1:29530414/1‑68 (MQ=255) aagcgccctgctgttgcctgacttttaaacacgaatccagcagggcGATTGCCCTACGGGGCATGcc < 1:20429192‑M2/21‑1 (MQ=255) ccGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCg < 1:30344948/67‑1 (MQ=255) ccGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGt < 1:23583563/68‑1 (MQ=255) atcgccctgctgttgcctgacttttaaacaagcatcccgcagggcGATTGCCCTACGGGGCATGCCGt < 1:21407220‑M2/23‑1 (MQ=255) atcgcccggctgttgccggacttttaaccaaccatcccgccgggcGATTGCCCTACGGGGCATGCCGt < 1:770955‑M2/23‑1 (MQ=255) atcGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGt < 1:11543061‑M1/65‑1 (MQ=255) cGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGtt < 1:19315790/68‑1 (MQ=255) cGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGtt < 1:5671068/68‑1 (MQ=255) cGGCCCTGCTGGATGCTTGTTTAAAAGGCAGCCAACCGCAGGGCGATTGCCCTACGGGGCATGCCGt < 1:23386802/67‑1 (MQ=255) ggCCCTGCTGGATGCTTTTTTAAAAGTCAGGCAACATCAGGGCGATTGCCCTACGGGGCATGCCGtta < 1:19573212/68‑1 (MQ=255) GCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttat < 1:33335060‑M1/68‑1 (MQ=255) GCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttat < 1:1131319‑M1/68‑1 (MQ=255) GCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGAGATTGCACTACGGGTGATGCCGttat < 1:4629558‑M1/68‑1 (MQ=255) CCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttatt < 1:32184359‑M1/68‑1 (MQ=255) CCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttatt < 1:10073539‑M1/67‑1 (MQ=255) CCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttatt < 1:23158831‑M1/67‑1 (MQ=255) CCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttatt < 1:34756785‑M1/67‑1 (MQ=255) CCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttatt < 1:15493002‑M1/67‑1 (MQ=255) CCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGttatt < 1:12557960‑M1/67‑1 (MQ=255) GCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTAc < 1:17971957‑M1/66‑1 (MQ=255) GCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGc > 1:32822834‑M1/1‑68 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTTCCCTACGGGGCATGCCGTTATTACGCtt < 1:13856874‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCtt < 1:4399286‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCtt < 1:6893726‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCtt < 1:26319357‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCtt < 1:12029452‑M1/68‑1 (MQ=255) TGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCtt < 1:25655711‑M1/68‑1 (MQ=255) aTGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCa > 1:32314842/1‑68 (MQ=255) aTGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCa > 1:20144092/1‑68 (MQ=255) tGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCa < 1:27857925/67‑1 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAgg < 1:16446542/68‑1 (MQ=255) gCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAg > 1:17499238/1‑67 (MQ=255) ttAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATc < 1:27081079/67‑1 (MQ=255) aaGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:26680035/1‑68 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:33173703/1‑67 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:11016062/1‑67 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTccc > 1:25285400/1‑67 (MQ=255) aGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCg < 1:29080135/68‑1 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTaaa < 1:23031248/66‑1 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTaaa < 1:18690428/66‑1 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTaaa < 1:18559305/66‑1 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAg > 1:31054416/1‑67 (MQ=255) cAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAg < 1:14832617/67‑1 (MQ=255) aaCAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGcc < 1:24362215/68‑1 (MQ=255) catcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGAAGGCGATCTTCCCGCTAAAGCCGt < 1:8738818‑M2/59‑1 (MQ=255) gcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:13377519‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:13534745‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:12169529‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:33878218‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:15186879‑M2/8‑68 (MQ=255) gcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg > 1:9184961‑M2/8‑68 (MQ=255) agggcTATTGCCCTACTGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg < 1:8537496‑M2/61‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAg > 1:35532494‑M2/6‑60 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGt < 1:3788209‑M2/59‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGt < 1:17023217‑M2/59‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGt < 1:4855773‑M2/59‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGt < 1:32629862‑M2/59‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGt < 1:8902514‑M2/59‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg < 1:8319660‑M2/61‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg < 1:27432482‑M2/61‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAg < 1:21175545‑M2/61‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt > 1:11878055‑M2/6‑67 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:10619696‑M2/62‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:15391124‑M2/62‑1 (MQ=255) agggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGt < 1:1717703‑M2/62‑1 (MQ=255) ggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGc > 1:35313108‑M2/4‑67 (MQ=255) gcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcac > 1:4151381‑M2/3‑68 (MQ=255) gcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcac > 1:1585465‑M2/3‑68 (MQ=255) gcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcac > 1:3155926‑M2/3‑68 (MQ=255) gcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcac > 1:24798112‑M2/3‑68 (MQ=255) gagATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGca > 1:36539280/3‑67 (MQ=255) cGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcac > 1:634664‑M2/2‑67 (MQ=255) cGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcac < 1:5260717‑M2/66‑1 (MQ=255) gATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGcaca > 1:3147089/1‑67 (MQ=255) | GGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCACA > CP009273/1101383‑1101516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |