| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 380858 | 76 (1.550) | 15 (0.370) | 11/210 | 3.0 | 21.4% | intergenic (+45/+64) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | = 380892 | 48 (1.200) | intergenic (+79/+30) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/380692‑380858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcacgcccgctcccacaAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGTC < NC_002947/380892‑380745 TCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGG > 2:96399/1‑150TCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGG < 1:408580/150‑1 AAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGC > 1:225598/1‑150 ACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGAGCTGCAGCGTGCCCAAATGTGATGTGCGGATCGAGTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCAC < 1:1129727/150‑1 GTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA > 2:426953/1‑150 GCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGC > 1:801551/1‑150 GGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCT < 2:801551/150‑1 GAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACACGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGG < 1:426953/150‑1 GAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGG < 2:176178/150‑1 CGTACTGTAGCGTGCCGAAAGTGGTTGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGATTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAA < 1:382083/150‑1 GAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGA < 2:531227/104‑1 GAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGA > 1:531227/1‑104 GAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGC < 2:74129/54‑1 GAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGC > 1:74129/1‑54 GATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGG < 2:786120/104‑1 GATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGG > 1:786120/1‑104 TGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGTCACCGCAGTCCTGAAGATAGCGATGA < 2:98168/78‑1 TGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGTCACCGCAGTCCTGAAGATAGCGATGA > 1:98168/1‑78 CAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGG > 1:1259047/1‑75 CAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGG > 1:1259038/1‑75 CAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGG < 2:1259038/75‑1 CAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGG < 2:1259047/75‑1 GCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGA < 2:1192592/150‑1 GCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTA > 1:351901/1‑150 GCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACG > 2:490298/1‑140 GCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACG < 1:490298/140‑1 ACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACAGCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGC > 1:712545/1‑150 GCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCC > 1:96399/1‑150 CCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTC < 1:1245025/150‑1 CCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTG < 1:494831/75‑1 CCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTG > 2:494831/1‑75 CACAAGGTTCACTTCAGTCCTGAAGATAGCGATGACCCTGTGGAATCGGGCGTGCGTGACGAAGAAG‑CAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCG > 2:370989/1‑150 CACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGC > 1:462737/1‑76 CACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGC < 2:462737/76‑1 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGT > 2:1257370/1‑150 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGT > 1:276029/1‑150 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCAC < 1:645459/125‑1 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCAC > 2:645459/1‑125 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCACTTTCGGCACGCTTCAGCACGACAGGATGTAGCCCTCGGCTTCGT > 1:1110402/1‑150 CAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGTC > 2:225598/1‑150 AAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAG < 1:135594/135‑1 AAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAG > 2:135594/1‑135 TCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/380692‑380858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcacgcccgctcccacaAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCG‑CGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGTC < NC_002947/380892‑380745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |