| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 528049 | 7 (0.140) | 20 (0.430) | 13/242 | 3.1 | 75.1% | noncoding (1284/2902 nt) | PP_23SC | 23S ribosomal RNA |
| ? | NC_002947 | = 701118 | NA (NA) | noncoding (1265/2902 nt) | PP_23SD | 23S ribosomal RNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GGCTCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/527894‑528049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcgcaTTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACATC < NC_002947/701118‑700972 GGCTCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAA < 2:1199190/150‑1 TCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTC > 1:880897/1‑150 CAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCG < 1:290127/150‑1 cgcATCATCGTAAGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAA > 1:992851/4‑124 cgcATCATCGTAAGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAA < 2:992851/121‑1 GTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTC > 1:853552/1‑82 GTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTC < 2:853552/82‑1 GGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTC > 2:322603/1‑77 GGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTC < 1:322603/77‑1 GCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGT < 2:45835/83‑1 GCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGT > 1:45835/1‑83 TGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTA < 1:773104/113‑1 TGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTA > 2:773104/1‑113 ATGAGTAACGACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGA < 2:1124083/140‑1 ATGAGTAACGACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGA > 1:1124083/1‑140 TAACGACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGG > 1:746329/1‑150 GACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCA > 1:515696/1‑150 GACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATG > 2:1114688/1‑130 GACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATG < 1:1114688/130‑1 GACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAA < 2:214574/79‑1 GACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAA > 1:214574/1‑79 ACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCAT > 1:1176324/1‑150 ACAATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCAT > 2:713173/1‑150 AATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACGTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGG > 1:754799/1‑150 AATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGG > 2:292085/1‑150 AATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGG > 1:1220585/1‑150 AATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGG > 1:56692/1‑150 AATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATG > 1:490158/1‑149 AATGCGAGTGAAAAACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATG < 2:490158/149‑1 ACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCA < 1:327545/66‑1 ACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCA > 2:327545/1‑66 ACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCT < 1:869014/59‑1 ACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCT > 2:869014/1‑59 CTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCACAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTAC > 1:1065788/1‑150 CTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAA < 1:669279/84‑1 CTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAA > 2:669279/1‑84 gCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACA > 1:297650/2‑150 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACA > 2:397553/1‑150 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACA > 2:103575/1‑150 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACA > 2:917915/1‑150 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACA < 2:995132/150‑1 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACA > 2:1100698/1‑150 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACA > 1:1028842/1‑150 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTA > 2:1046594/1‑148 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTA < 1:1046594/148‑1 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCC > 2:201038/1‑117 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCC < 1:201038/117‑1 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACC > 2:1125578/1‑95 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACC < 1:1125578/95‑1 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTC > 2:591085/1‑88 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTC < 1:591085/88‑1 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCA < 2:342036/64‑1 TCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCA > 1:342036/1‑64 CGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATACGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACAT < 2:368111/150‑1 CGCATTGTCGTTACTCATGTCAGCATTCGCACTTATGATACCTACCGCAAGCTTCAAAACTCGCCTTCAGAGGCGTACAGAGCGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACAT > 2:145580/1‑150 GCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACATC < 2:846536/150‑1 GCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACATC < 2:1009848/150‑1 GCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACATC < 2:515696/150‑1 ATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAG < 1:979476/136‑1 ATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAG > 2:979476/1‑136 ATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCA < 1:74003/94‑1 ATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCA > 2:74003/1‑94 GGCTCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/527894‑528049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcgcaTTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATGATACCCGTAGCTTCGGTGCATGGTTTGAGCCCCGTTACATC < NC_002947/701118‑700972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |