New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5338192 =	59 (1.200)	14 (0.320)	14/226	2.6	22.8%	intergenic (+27/‑216)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
	?	NC_002947	5338252 =	43 (0.990)					intergenic (+87/‑156)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein

CAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTG  >  NC_002947/5338043‑5338330                                                                                                                                                      |                                                                                                                                            tcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggtgggtacctgtgccggccctttcgcgggcatg                                                                                                                                             <  2:106891‑M1/1‑1 (MQ=255)  cgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGc                                                                                                                                            >  1:469855‑M1/149‑150 (MQ=255)  aGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGgcgcgc                                                                                                                                            >  2:698298/1‑150 (MQ=255)       acagacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGcc                                                                                                                                       >  1:54328/1‑149 (MQ=255)        cagacCCGCAACTGCTTTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCTATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTc                                                                                                                                      <  2:522183/150‑1 (MQ=255)           ggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCca                                                                                                                                   >  1:831505‑M1/140‑150 (MQ=255)           acCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGcagtgc                                                                                                                                   <  2:637646/150‑6 (MQ=255)           acCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCca                                                                                                                                   <  2:601074/150‑1 (MQ=255)             ccGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCcaca                                                                                                                                 >  2:412833/1‑150 (MQ=255)               ggAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAgg                                                                                                                               >  2:510395/1‑150 (MQ=255)                       tgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCAcg                                                                                                                       >  2:588882/1‑149 (MQ=255)                       tgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCAcg                                                                                                                       <  1:588882/149‑1 (MQ=255)                            gcgcCGCCGGCGGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCt                                                                                                                 >  2:928297/1‑150 (MQ=255)                            gCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCt                                                                                                                 >  2:630325/1‑150 (MQ=255)                            cttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCt                                                                                                                 <  2:870100‑M1/28‑1 (MQ=255)                             ttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcacGCCCGCTCCCACAGG‑AACCACGCCGCCtt                                                                                                                <  1:1041506‑M1/29‑1 (MQ=255)                              tattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggattttgtttttagggggggtacatgtcccgcgcgtttcgcgtgcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTc                                                                                                               >  1:870100‑M1/121‑150 (MQ=255)                                cGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCaa                                                                                                             <  1:510395/150‑1 (MQ=255)                                 gCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAg                                                                                                            >  2:1251616/1‑150 (MQ=255)                                          ggTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTggg                                                                                                   <  2:446600/150‑1 (MQ=255)                                          aaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTggg                                                                                                   <  2:1154259‑M1/42‑1 (MQ=255)                                                 gCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTAcc                                                                                              <  1:1131468/148‑1 (MQ=255)                                                 gCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTAcc                                                                                              >  2:1131468/1‑148 (MQ=255)                                                    gTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         <  1:928297/150‑1 (MQ=255)                                                    gTCGCGCGCGCGCAATGGCGCCACGATCAGGCGGTGCAGGCGAACACGGGGCCATAGGTTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         <  2:465708/150‑1 (MQ=255)                                                       gcgcgcgcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAg                                                                                      >  1:939751/1‑150 (MQ=255)                                                        atgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtaccggcctcttcgcgggcgcGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGc                                                                                     >  2:1167738‑M1/95‑150 (MQ=255)                                                          gctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcacGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCgg                                                                                   >  2:1041506‑M1/93‑150 (MQ=255)                                                           ctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         <  1:216099‑M1/52‑1 (MQ=255)                                                           ctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         >  2:216099‑M1/92‑143 (MQ=255)                                                            tagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGc                                                                                 >  1:1154259‑M1/91‑150 (MQ=255)                                                              gcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGcc                                                                                                                                           >  1:1218531‑M1/89‑91 (MQ=255)                                                              gcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGcc                                                                                                                                           <  2:1218531‑M1/3‑1 (MQ=255)                                                              gcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCAt                                                                               >  2:741792‑M1/89‑150 (MQ=255)                                                               gcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGCTTTGCGCTGAAACTTTAGCGGCCTCTTCGCGGGTGGGAACACTGCCGAAGG‑AACCACGCCGGCTTCAAGTCCTGTCGTCTACCGGTGGCAGCGGGCATg                                                                              >  2:16355/1‑150 (MQ=255)                                                               gcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACgccgcc                                                                                                                  <  1:1210415/114‑1 (MQ=255)                                                               gcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACgccgcc                                                                                                                  >  2:1210415/1‑114 (MQ=255)                                                                 aaTGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCAt                                                                               <  1:718113/147‑1 (MQ=255)                                                                 aaTGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCAt                                                                               >  2:718113/1‑147 (MQ=255)                                                                       gggcGGAAGCGATCGCGCAGCGGACCACGGTGACAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCcgctcc                                                                      <  2:309099/147‑4 (MQ=255)                                                                        gcCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGaaa                                                                     >  1:1159131/1‑150 (MQ=255)                                                                        acagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgt                                                                                           >  2:481986‑M1/79‑128 (MQ=255)                                                                        acagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgt                                                                                           <  1:481986‑M1/50‑1 (MQ=255)                                                                         ccGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAGCTTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTAGCCAAGTGGCCGTGAAGG‑CGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGaaga                                                                    <  1:556606/150‑3 (MQ=2)                                                                            gAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                 >  2:589551/1‑150 (MQ=255)                                                                            gAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                 <  2:939751/150‑1 (MQ=255)                                                                            gAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCACACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                 <  2:1283012/150‑1 (MQ=255)                                                                             aaGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGcc                                                                <  1:698298/150‑1 (MQ=255)                                                                                 gATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGca                                                            >  1:1069854/1‑150 (MQ=255)                                                                                  aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgt                                                                                           >  2:276001/1‑118 (MQ=255)                                                                                  aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgt                                                                                           <  1:276001/118‑1 (MQ=255)                                                                                  aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCt                                                                                             >  2:943252/1‑116 (MQ=255)                                                                                  aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCt                                                                                             <  1:943252/116‑1 (MQ=255)                                                                                         aGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGACCGGCACAGGTAcc                                                    >  1:106891/1‑150 (MQ=255)                                                                                             gACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcccccc                                                <  2:1159131/150‑1 (MQ=255)                                                                                                 aCGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTaa                                            >  2:1642/1‑150 (MQ=255)                                                                                                         ttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgtg                                                                                          >  2:451650‑M1/46‑96 (MQ=255)                                                                                                         ttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgtg                                                                                          <  1:451650‑M1/51‑1 (MQ=255)                                                                                                         agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                    <  2:1069854/150‑1 (MQ=255)                                                                                                          gagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAg                                   >  1:999811/1‑150 (MQ=255)                                                                                                             gcggATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                    >  1:1292113/4‑146 (MQ=255)                                                                                                             gCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                    <  2:1292113/146‑1 (MQ=255)                                                                                                               tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAg                              >  1:1153064/1‑150 (MQ=255)                                                                                                                 aTTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTa                            >  2:112577/1‑150 (MQ=255)                                                                                                                  tttGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTaa                           >  1:788101/1‑150 (MQ=255)                                                                                                                   ttGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTaaa                          <  1:1251616/150‑1 (MQ=255)                                                                                                                           aaCCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAAcc                  >  2:329424/1‑150 (MQ=255)                                                                                                                              cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCcgc                                                                         <  1:1217637/92‑1 (MQ=255)                                                                                                                              cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCcgc                                                                         >  2:1217637/1‑92 (MQ=255)                                                                                                                              cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGa                                                                       >  1:935305/1‑94 (MQ=255)                                                                                                                              cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGa                                                                       <  2:935305/94‑1 (MQ=255)                                                                                                                               tttACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTg              <  1:630325/150‑1 (MQ=255)                                                                                                                                 tACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGc            <  1:589551/150‑1 (MQ=255)                                                                                                                                 tACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGc            >  1:75182/1‑150 (MQ=255)                                                                                                                                          ctTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgt   <  1:1642/150‑1 (MQ=255)                                                                                                                                           ttCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGcc                                 <  2:611710/119‑1 (MQ=255)                                                                                                                                           ttCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGcc                                 >  1:611710/1‑119 (MQ=255)                                                                                                                                           ttCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgtg  <  2:54328/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                            CAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGG‑AACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTG  >  NC_002947/5338043‑5338330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.