Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,287,7670GC39.6% 224.9 / inf 262intergenic (‑167/+62)PP_2010/PP_2011cytochrome b561/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (63/94);  new base C (58/45);  total (121/141)
Fisher's exact test for biased strand distribution p-value = 1.14e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 270 total aligned reads displayed.

AGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGT  >  NC_002947/2287618‑2287916
                                                                                                                                                     |                                                                                                                                                      
aGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTgg                                                                                                                                                        <  1:2849245/150‑1 (MQ=255)
    cTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGc                                                                                                                                                    <  2:3412392/150‑1 (MQ=255)
    cTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGc                                                                                                                                                    <  2:1236196/150‑1 (MQ=255)
     tGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGcc                                                                                                                                                   >  2:587849/1‑150 (MQ=255)
      gAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCt                                                                                                                                                  <  2:6866442/150‑1 (MQ=255)
      gAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCt                                                                                                                                                  <  1:1880788/150‑1 (MQ=255)
        aTGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCtgt                                                                                                                                                <  1:8031614/150‑1 (MQ=255)
         tGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGGCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCtgtg                                                                                                                                               <  1:3597409/150‑1 (MQ=255)
         tGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCtgtg                                                                                                                                               <  2:7481357/150‑1 (MQ=255)
         tGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACtgtg                                                                                                                                               <  2:4258670/150‑1 (MQ=255)
         tGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGCCCAACTGCACAGGCTTCCAAGACtgtg                                                                                                                                               <  1:6231640/150‑1 (MQ=38)
         tGGCGCTCGTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCtgtg                                                                                                                                               <  1:7048114/150‑1 (MQ=255)
          ggCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCTGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAAATGCACAGTCTTGGAAGCCTGTGc                                                                                                                                              <  2:2214026/150‑1 (MQ=255)
          ggCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGc                                                                                                                                              <  2:3438062/150‑1 (MQ=255)
          ggCGCTCGTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGc                                                                                                                                              <  1:1635426/150‑1 (MQ=37)
           gcgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCa                                                                                                                                             <  1:708702/150‑1 (MQ=255)
           gcgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCa                                                                                                                                             <  1:1087420/150‑1 (MQ=255)
           gcgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCa                                                                                                                                             <  2:7416242/150‑1 (MQ=255)
           gcgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTATTGGAAGCCTGTGCa                                                                                                                                             >  2:3921683/1‑150 (MQ=255)
           gcgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCa                                                                                                                                             <  2:6092011/150‑1 (MQ=255)
           gcgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTACACCTGCAGAGTCTTGGAAGCCTGTGCa                                                                                                                                             <  2:5366381/150‑1 (MQ=255)
             gcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGt                                                                                                                                           <  2:818294/150‑1 (MQ=255)
             gcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTCGCCTG‑CTCCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGtt                                                                                                                                          <  1:2381811/150‑1 (MQ=18)
              ctctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCGGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGtt                                                                                                                                          <  1:4229121/150‑1 (MQ=37)
              ctctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCGGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGtt                                                                                                                                          <  1:6220637/150‑1 (MQ=37)
              ctctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGtt                                                                                                                                          <  2:4623515/150‑1 (MQ=255)
              ctctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGtt                                                                                                                                          <  1:8196099/150‑1 (MQ=37)
              ctctTGCTGGCGCTCAGGAGTCATTTGAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGtt                                                                                                                                          <  2:144672/150‑1 (MQ=255)
                     tGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACtgt                                                                                                                                   <  2:1612137/150‑1 (MQ=255)
                      ggCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACtgtg                                                                                                                                  <  2:4832649/150‑1 (MQ=255)
                      ggCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACtgtg                                                                                                                                  <  1:806860/150‑1 (MQ=255)
                       gcgcTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTgg                                                                                                                                 <  1:3800356/150‑1 (MQ=255)
                         gcTCATGAGTCATTTTAATGGCTACCGGAAAAAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGa                                                                                                                               <  1:5871617/150‑1 (MQ=255)
                             aGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCgg                                                                                                                           <  1:1440722/150‑1 (MQ=255)
                             aGGAGACATTATAATGGCTACCGGAAACAGATCTTTGAGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTCGCACGCCCGCTCCCACAGTCCAACTTCACAGACTTGGAAGCCTGTGCAGTTGGACTGTGGGAGctg                                                                                                                           <  2:7893407/150‑3 (MQ=37)
                              ggAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCggg                                                                                                                          <  1:3418442/150‑1 (MQ=255)
                                  tCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCGGTGCAGTTGGACTGTGGGAGCGGGCGTg                                                                                                                      >  2:8294460/1‑150 (MQ=255)
                                     ttttAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTgg                                                                                                                                 <  2:5682851/136‑1 (MQ=255)
                                     ttatAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTGCGCTGGCACGCCCGCTCCCACAGGCCAACAGCACAGGCTTGGAAGCCTGGGCAGGTGGAATGTGGGAGCGGGCGTGccc                                                                                                                   >  2:2928505/4‑150 (MQ=255)
                                       ttAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTGCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCTGTTGGACTGTGGGAGCGGGCGTGCCcgc                                                                                                                 <  2:1058755/150‑1 (MQ=255)
                                             gCTACCGGAAACAGATCTTTGCGCCTGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAggg                                                                                                           <  2:6752101/150‑1 (MQ=255)
                                                  cGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCGCCCACAGGCCAACTGCACAGTCTTGGAAGCCAGTGCAGTTGGACTGTGGGCGCGGGCGTGCCCGCGAAGGGGCCgg                                                                                                      >  2:8235072/1‑150 (MQ=255)
                                                         ctaTCTTTGCGCCAGGTCTGTCAAAAATGTGTTCCCACCCACCGGCCTCTACGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAACCCTGTGCAGTTGTACTGTGGGCGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGc                                                                                              <  1:2699255/148‑1 (MQ=25)
                                                           aTCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACTGTCTTGGATGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGa                                                                                            <  1:4319359/150‑1 (MQ=255)
                                                           aTCTTGGCGCCAGGGCTGGGAAAAATGTGTGGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCACCTGCACAGTCTTGGAAGCCTGTGCAGTTGGCCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGa                                                                                            <  2:8377173/150‑1 (MQ=25)
                                                            tCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCAAAGTGCAACTGCACAGTCTTGGAATCCTGTTGAGTTGGACTGTTGGTGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAgggggg                                                                                           >  2:2699255/1‑146 (MQ=255)
                                                                tGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCa                                                                                       <  2:8119426/150‑1 (MQ=255)
                                                                tGCGCCAGGTCGGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCACCTGCACAGTCTTGGAAGCCTGGGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCa                                                                                       <  1:5630319/150‑1 (MQ=255)
                                                                ggcgcCTGGTCGGTGAAACCGGGGGGGCCCGCCCCCGGCCGCGGCGCGGGCCCGCCCGCCCCCCCCGCCCAACGGCCCCGTCTGGGCCGCGTGGGCAGTGGGAGGGGGGGCGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCa                                                                                       <  1:1814042/149‑1 (MQ=255)
                                                                          cTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGc                                                                             <  2:7560473/150‑1 (MQ=255)
                                                                           tgtgAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGc                                                                                                                         <  1:8453484/106‑1 (MQ=255)
                                                                                     gtgtTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGGTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCa                                                                  >  2:3552474/1‑150 (MQ=255)
                                                                                       gtggccagccaCGGGCCACTTCGCTGGCACGCCCGCTCCAAAAGTCCAACTGCACCTTCTTGTAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGt                                                                <  1:1586460/147‑1 (MQ=25)
                                                                                          gccagccaCCGGCCTCTTCGCGGGCACGCCCGCTCCCACCGTCCAACTGCACTGTCTTGTATGCCTGTGCTGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGtcat                                                             <  1:5911317/150‑1 (MQ=25)
                                                                                               ccaCCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGGACCACTTCCCAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGGGGGGGCGTGCCCCCGGACGGGCCGG‑GGCCGGCGCCATAAGGTTCCGGGCAGATAGGGCCCGTCAAcaccc                                                        >  2:3028651/1‑150 (MQ=21)
                                                                                                   cGGCCTCTTCGCTGGCACGCCCGCGCCCCCAGGCCAACAGCACAGTCTTGGAAGCCGGTGCAGGTGGACTGTGGGAGCGGGCGTGCCCGCGCAGGGGCCGG‑AGCAGGCGCCATCGGTTACCCGGCAGATAGGGCCCGTCATcacccaccc                                                    >  2:2238737/1‑149 (MQ=25)
                                                                                                                       ccGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGcctcc                                >  1:2997043/1‑150 (MQ=255)
                                                                                                                           tCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGcc                            >  1:1680647/1‑150 (MQ=255)
                                                                                                                             ccACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGc                                    <  1:7199893/140‑1 (MQ=255)
                                                                                                                             ccACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGGGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGAGAGGGCCAGGCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAg                          >  2:5462059/1‑150 (MQ=255)
                                                                                                                             ccACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATa                                                                        <  2:2764224/104‑1 (MQ=17)
                                                                                                                              cacaGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAgg                         >  1:7840939/1‑150 (MQ=255)
                                                                                                                              cacaGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAgg                         >  1:2078237/1‑150 (MQ=255)
                                                                                                                                   tCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCa                    >  2:3219601/1‑150 (MQ=255)
                                                                                                                                    ccAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCAt                   >  2:5802904/1‑150 (MQ=255)
                                                                                                                                     cAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACAAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATc                  >  1:472175/1‑150 (MQ=37)
                                                                                                                                      accTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCa                                                                            <  1:4818268/89‑1 (MQ=255)
                                                                                                                                      aaCTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCa                                                                            >  2:4818268/1‑91 (MQ=255)
                                                                                                                                      aaCTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  1:3647539/1‑150 (MQ=255)
                                                                                                                                      aaCTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  1:3988949/1‑150 (MQ=255)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTTGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  1:5781065/1‑150 (MQ=37)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGaa                                                 <  1:3436363/118‑1 (MQ=25)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  2:8621500/1‑150 (MQ=255)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  1:4526289/1‑150 (MQ=255)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  2:4443192/1‑150 (MQ=255)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  2:4071683/1‑150 (MQ=255)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCAGCGAAGAGGCCGGTGGCTGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATc                  >  2:3397219/1‑150 (MQ=18)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCAGCGAAGAGGCCGG‑TGCAGGCGACATCAGTTACCGGGCAGATAgg                                                                      >  1:101969/1‑97 (MQ=14)
                                                                                                                                      aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTATGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                 >  2:7187104/1‑150 (MQ=37)
                                                                                                                                       aCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCgg                >  2:2177404/1‑150 (MQ=255)
                                                                                                                                         tGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCa              >  2:3690972/1‑150 (MQ=255)
                                                                                                                                         tGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCa              >  2:1756849/1‑150 (MQ=255)
                                                                                                                                         tGCACAGGCTTCCAAGTCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCa              >  2:6401891/1‑150 (MQ=255)
                                                                                                                                         tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGGAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCa              >  1:6614237/1‑150 (MQ=37)
                                                                                                                                         tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCCCCATCGGCa              >  1:5173067/1‑150 (MQ=37)
                                                                                                                                         tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCa              >  2:6406041/1‑150 (MQ=255)
                                                                                                                                         tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCa              >  1:6306600/1‑150 (MQ=255)
                                                                                                                                         tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCa              >  2:7252639/1‑150 (MQ=255)
                                                                                                                                          gCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGCGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGATACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGACTCCTGCCAGACACCATCGGCaa             >  2:897740/1‑149 (MQ=37)
                                                                                                                                           cacaGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATc            >  1:7649193/1‑150 (MQ=255)
                                                                                                                                           cacaGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATc            >  2:601746/1‑150 (MQ=255)
                                                                                                                                           cacaGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATc            >  1:3243287/1‑150 (MQ=255)
                                                                                                                                           cacaGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATc            >  1:7740033/1‑150 (MQ=255)
                                                                                                                                           cacaGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATc            >  1:7294010/1‑150 (MQ=255)
                                                                                                                                            acaGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGAt                                                                         >  2:3940580/1‑88 (MQ=255)
                                                                                                                                              aGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAgg         >  2:5550924/1‑150 (MQ=255)
                                                                                                                                              aGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAgg         >  1:5432574/1‑150 (MQ=255)
                                                                                                                                                tCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCa       >  2:4489303/1‑150 (MQ=255)
                                                                                                                                                  ttGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCAcc     >  1:5032518/1‑150 (MQ=255)
                                                                                                                                                    ggAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGcttcca   <  2:3648489/150‑6 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
AGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGG‑AGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGT  >  NC_002947/2287618‑2287916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑