Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,345,0680AT35.1% 116.1 / 90.5 98intergenic (+60/‑271)ribAB‑II/PP_38143,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (27/34);  new base T (18/15);  total (48/50)
Fisher's exact test for biased strand distribution p-value = 3.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

CTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGC  >  NC_002947/4344919‑4345217
                                                                                                                                                      |                                                                                                                                                     
cTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGa                                                                                                                                                       <  2:3409110/150‑1 (MQ=255)
cTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGa                                                                                                                                                       <  2:3071414/150‑1 (MQ=255)
cTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGa                                                                                                                                                       <  1:1359583/150‑1 (MQ=255)
cTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGa                                                                                                                                                       <  1:1383784/150‑1 (MQ=255)
cTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGa                                                                                                                                                       <  1:1503668/150‑1 (MQ=255)
 tGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAg                                                                                                                                                      <  1:5141166/150‑1 (MQ=255)
 tGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAg                                                                                                                                                      <  1:4719903/150‑1 (MQ=255)
  ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAgg                                                                                                                                                     <  1:2200295/150‑1 (MQ=255)
  ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAgg                                                                                                                                                     <  1:2977972/150‑1 (MQ=255)
  ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAgg                                                                                                                                                     <  1:3292676/150‑1 (MQ=255)
    ggCCGCCGCTGAAATACGCGTGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGt                                                                                                                                                   <  1:2842162/150‑1 (MQ=255)
    ggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGt                                                                                                                                                   <  2:1582854/150‑1 (MQ=255)
     gccgccGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTg                                                                                                                                                  <  1:3133854/150‑1 (MQ=255)
     gccgccGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTg                                                                                                                                                  <  1:3134113/150‑1 (MQ=255)
           gcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGAcacca                                                                                                                                            <  2:4138793/150‑1 (MQ=255)
           gcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGAcacca                                                                                                                                            <  2:1298887/150‑1 (MQ=255)
            cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                           <  1:2395984/150‑1 (MQ=255)
             tGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACaccacc                                                                                                                                          <  2:2119870/150‑1 (MQ=255)
              gAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCg                                                                                                                                         <  1:4639476/150‑1 (MQ=255)
                aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                       <  2:3211343/150‑1 (MQ=255)
                aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                       <  1:4956910/150‑1 (MQ=255)
                aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                       <  2:4003437/150‑1 (MQ=255)
                    cgcgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCAt                                                                                                                                   <  1:2837330/150‑1 (MQ=255)
                       ggggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcg                                                                                                                                <  1:2075635/150‑1 (MQ=255)
                       ggggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcg                                                                                                                                <  1:2075603/150‑1 (MQ=255)
                        gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                               <  1:2263779/150‑1 (MQ=25)
                        gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                               <  2:1090450/150‑1 (MQ=25)
                        gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                               <  2:153229/150‑1 (MQ=25)
                        gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                               <  1:2042081/150‑1 (MQ=25)
                        gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                               <  2:1912991/150‑1 (MQ=25)
                        gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                               <  1:1541391/150‑1 (MQ=255)
                        gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                               <  2:3560600/150‑1 (MQ=255)
                        gggCTGGCGGGCTAAGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                               <  2:4302342/150‑1 (MQ=25)
                         ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                              <  1:521937/150‑1 (MQ=25)
                         ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                              <  1:76026/150‑1 (MQ=255)
                         ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                              <  1:1012042/150‑1 (MQ=25)
                          gcgggCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACACGCACTTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  2:804038/147‑1 (MQ=255)
                          gcgggCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  2:3121241/147‑1 (MQ=255)
                          gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  1:2789618/150‑1 (MQ=255)
                          gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  2:562914/150‑1 (MQ=255)
                          gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  2:1217233/150‑1 (MQ=255)
                          gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  2:1803020/150‑1 (MQ=255)
                          gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  1:2789547/150‑1 (MQ=255)
                          gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGGAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                             <  2:4788583/150‑1 (MQ=255)
                          gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                             <  1:113508/150‑1 (MQ=25)
                          gCTGACGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTAACCGCGGATGCGCGGGGGTCACCACCCACGCATTCGCgg                                                                                                                             >  2:840485/1‑150 (MQ=255)
                           cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCggg                                                                                                                            <  2:307043/150‑1 (MQ=255)
                            tGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAAAGCGAGGGTGACACCACCCACCCAATCGCgggg                                                                                                                           >  2:3359423/1‑149 (MQ=255)
                                gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAc                                                                                                                       <  1:493489/150‑1 (MQ=255)
                                   cTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCg                                                                                                                    <  1:1216083/150‑1 (MQ=255)
                                    tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTg                                                                                                                                                  <  1:3006322/119‑1 (MQ=255)
                                    tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGTCGGTg                                                                                                                                                  >  2:3006322/1‑119 (MQ=255)
                                        aGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑GTTAACCCCCAAAGCCAGGGTGACACCACCCACGCCTACGCCGGTAAACCCGcgaca                                                                                                               >  2:4181268/1‑146 (MQ=255)
                                                        gagCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTTACCCCCCAAT‑CGAGGGGGACACCACCCACGCAATCGCCGGTAAAAACCCTCCGACAGGGCCCGGGGTgg                                                                                               >  2:2701362/1‑149 (MQ=255)
                                                        gagCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑GTTTCCCGCGCATGGGCGGGTGGCACCACCGCCGCATTCGCGGGGAAACCCGCGCCGACAGGGgccggggggg                                                                                               >  2:2701258/1‑143 (MQ=255)
                                                         agCATCCCGTTCGAGCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTTGGAGCGGG‑TTTTGCCGCGAATGAGTGGGTGTCAGCAGGGAGGGATTAGCGGGTTAAACCGCTGCTAGATGGGCCTTGGTggt                                                                                              >  2:4708111/1‑148 (MQ=255)
                                                         agCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTTCCCGCGAATGGGATGGTTTCAAAAACGTGGGATTTGCGGGTAAAACCGGTACTACAGGGCCCTTGGTggt                                                                                              >  2:4708042/1‑148 (MQ=255)
                                                         agCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTTCCCGCGAATGGGAGGGTGAAAACAACGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTggt                                                                                              >  2:4708090/1‑148 (MQ=38)
                                                                cGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTTACCCCCAAAGCGAGGGTGTCACCACCCCCGCCATAGCGGGGAAAACCCCTCCGACAGGGCCCGTGGTGCGTTTGTCa                                                                                       >  2:3207784/1‑150 (MQ=255)
                                                                                 gttggCTTATAACACACAAGCACTTGTTTTCGCGGGGCCCTGTTGGAGGGGT‑TTTACCGGCTATTGCGTGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCg                                                                      <  2:4235505/148‑1 (MQ=25)
                                                                                       tGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAAAGCGGGGGTGGCACCCCCCCCGCATTCGCCGGTAAACCCGCGCCGACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGcc                                                                >  2:1716573/1‑150 (MQ=37)
                                                                                                              tgggggggCCGGGTGGGTGGGGG‑TTTCCCCGGGATTGCGTGGGTGACCCCCCGGCGGCTTTGGGGGGTAACCCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                         <  2:2008167/146‑1 (MQ=255)
                                                                                                                gCGGGGCCCTGTAGGCGCGGG‑TGTCCCCGCGAATGCG‑GGGTGACACCCCCGACGCATTCGGGGTTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGaa                                      <  2:763047/150‑1 (MQ=38)
                                                                                                                                  ggg‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATc                     >  2:2829154/1‑150 (MQ=255)
                                                                                                                                    g‑TTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCCTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATcac                   >  2:4563089/1‑148 (MQ=21)
                                                                                                                                    g‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTgg                                                                                                  <  2:258335/71‑1 (MQ=255)
                                                                                                                                    g‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTgg                                                                                                  >  1:258335/1‑71 (MQ=255)
                                                                                                                                     gttttgccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                   >  2:4745957/7‑150 (MQ=25)
                                                                                                                                          cccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGa              >  2:386339/1‑150 (MQ=25)
                                                                                                                                          cccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGa              >  2:2747018/1‑150 (MQ=255)
                                                                                                                                           ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                         >  1:1848194/1‑122 (MQ=21)
                                                                                                                                           ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                         <  2:1848194/122‑1 (MQ=21)
                                                                                                                                           ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:2671316/1‑150 (MQ=25)
                                                                                                                                           ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:2468322/1‑150 (MQ=25)
                                                                                                                                           ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:3563235/1‑150 (MQ=25)
                                                                                                                                           ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:3268238/1‑150 (MQ=25)
                                                                                                                                           ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCACTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCACATACCTCTTGCAAAAATCTTGGAATACCAAAATATGAAATCACGTATAc             >  1:1014443/1‑150 (MQ=21)
                                                                                                                                           ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTCCCGGGCCCTTGGTGCTTGTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAAGACCATACTATGATCTCCCGTAGAc             >  2:4658187/1‑150 (MQ=39)
                                                                                                                                           ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:1548811/1‑150 (MQ=255)
                                                                                                                                           ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:4911218/1‑150 (MQ=255)
                                                                                                                                           ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  2:5080243/1‑150 (MQ=255)
                                                                                                                                           ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc             >  1:3397489/1‑150 (MQ=255)
                                                                                                                                            cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc            >  2:4685024/1‑150 (MQ=25)
                                                                                                                                            cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATCTCCCGTAGAcc            >  2:1026267/1‑150 (MQ=255)
                                                                                                                                            cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc            >  1:3846633/1‑150 (MQ=255)
                                                                                                                                             gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:26706/1‑150 (MQ=25)
                                                                                                                                             gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  2:4775605/1‑150 (MQ=25)
                                                                                                                                             gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:26675/1‑150 (MQ=25)
                                                                                                                                             gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:2050428/1‑150 (MQ=25)
                                                                                                                                             gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:4521770/1‑150 (MQ=255)
                                                                                                                                             gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:3360972/1‑150 (MQ=255)
                                                                                                                                             gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:1162749/1‑150 (MQ=255)
                                                                                                                                             gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTGGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt           >  1:3361095/1‑150 (MQ=255)
                                                                                                                                                  tGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt      >  1:4382009/1‑150 (MQ=255)
                                                                                                                                                   gCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTc     >  1:3864614/1‑150 (MQ=255)
                                                                                                                                                    cGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCt    >  2:2577611/1‑150 (MQ=255)
                                                                                                                                                     gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg   >  1:3494352/1‑150 (MQ=255)
                                                                                                                                                     gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg   >  2:5101070/1‑150 (MQ=255)
                                                                                                                                                     gAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg   >  1:1935248/1‑150 (MQ=255)
                                                                                                                                                      aGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGc  >  1:4655969/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGG‑TTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGC  >  NC_002947/4344919‑4345217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑