| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,011,323 | +T | intergenic (‑258/+192) | PP_0871 ← / ← SBRG_Ecoli_galM | glycine betaine/carnitine/choline ABC transporter permease/SBRG_Ecoli_galM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,011,323 | 1 | . | T | 99.3% | 1625.1 / 1.3 | 454 | intergenic (‑258/+192) | PP_0871/SBRG_Ecoli_galM | glycine betaine/carnitine/choline ABC transporter permease/SBRG_Ecoli_galM |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base T (240/211); total (242/212) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 467 total aligned reads displayed.
GAAAATGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑G‑CTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGCT > NC_002947/1011174‑1011466 | aaaaTGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑gt < 2:3219092/150‑2 (MQ=255) aaTGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑gtct < 1:2562407/150‑4 (MQ=255) tgatgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAat > 2:7332284/1‑150 (MQ=255) tgatgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAat > 2:4572923/1‑150 (MQ=255) gatgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatc > 1:5989613/1‑150 (MQ=255) gatgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCAGTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatc > 2:1662896/1‑150 (MQ=255) atgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatca > 1:5900436/1‑150 (MQ=255) tgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatcat > 1:10140284/1‑150 (MQ=255) tgaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatcat < 2:7720101/150‑1 (MQ=255) gaAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAatcatc > 1:9615200/1‑150 (MQ=255) aCCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCttt > 2:5963615/1‑150 (MQ=255) aCCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCAGTGGGCGTAAAGGTTCCCATATGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGAGAGAAATACAGCTACTTGAT‑GTCTCAAATAATCttt > 2:2839488/1‑150 (MQ=255) cAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTa > 2:3598778/1‑150 (MQ=255) cgTCCCCAACCGACGGGGGTTGCTGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGCGGCGGCATTTGGCCTGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTaa < 1:9193826/149‑1 (MQ=255) aGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTaa < 1:6249153/150‑1 (MQ=255) aGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTaa < 1:8267357/150‑1 (MQ=255) aGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTaa < 1:7313437/150‑1 (MQ=255) gTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAAt > 1:1549854/1‑150 (MQ=255) ccAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGata > 1:27565/1‑150 (MQ=255) cAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGataa > 1:543873/1‑150 (MQ=255) aaCCGACGCGGGTTGCTGGGGAGTGGACGTCTCCGTGGGCGTAACGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGGTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGataat < 1:9891103/150‑1 (MQ=255) aaCCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGataat > 2:4258474/1‑150 (MQ=255) aaCCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGataat > 1:4983084/1‑150 (MQ=255) ccGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGAtaataa > 1:78654/1‑150 (MQ=255) gCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATtctc > 2:9534825/1‑150 (MQ=255) cGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCa < 1:3759574/150‑1 (MQ=255) gggTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGATAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCAt < 1:2153939/150‑1 (MQ=255) gggTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCAt < 2:989851/150‑1 (MQ=255) ggTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCAtt > 2:5256004/1‑150 (MQ=255) gTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATta < 1:2503177/150‑1 (MQ=255) ttGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATtat > 2:9105086/1‑150 (MQ=255) aGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTg > 1:4039646/1‑150 (MQ=255) ggggAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGc > 1:3069784/1‑150 (MQ=255) gggAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGcc > 1:9315756/1‑150 (MQ=255) gggAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGcc > 1:945630/1‑150 (MQ=255) gggAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGcc < 1:9534825/150‑1 (MQ=255) tGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGcgac > 2:2905739/1‑150 (MQ=255) aCGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGaa < 1:7691172/150‑1 (MQ=255) gTCTCCGTGGGCGTAATGGTTCCCATCTGTGGCGGCATTTGGCCAGTGTTATTCGCTGGGTTGGGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGc < 1:6266571/150‑1 (MQ=255) tcCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAAc < 2:10157508/150‑1 (MQ=255) tcCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAAc > 2:889597/1‑150 (MQ=255) gggCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGAGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCaa > 2:2671727/1‑150 (MQ=255) gCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATg < 2:5632808/150‑1 (MQ=255) gCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATg < 1:1897591/150‑1 (MQ=255) gCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATg > 2:3723438/1‑150 (MQ=255) tAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCAtt < 1:5825402/119‑1 (MQ=255) aaGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTAc < 2:9446335/150‑1 (MQ=255) aaGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTAc > 1:4330031/1‑150 (MQ=255) aaGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTAc > 2:5836122/1‑150 (MQ=255) aaGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTAc < 2:2328032/150‑1 (MQ=255) gTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCa > 1:4477409/1‑150 (MQ=255) gTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCa > 2:334475/1‑150 (MQ=255) gTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCa > 1:7046856/1‑150 (MQ=255) ttCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCAt > 1:1354901/1‑150 (MQ=255) tCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGTCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATATTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGAATa > 2:862892/1‑150 (MQ=255) cccATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATaa > 1:8130168/1‑150 (MQ=255) cccATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATaa > 2:7440124/1‑150 (MQ=255) ccATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAAc > 2:4894767/1‑150 (MQ=255) ccATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAAc > 1:5189914/1‑150 (MQ=255) aTCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCa > 2:2139519/1‑150 (MQ=255) tCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACa > 1:1800626/1‑129 (MQ=255) tCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACa < 2:1800626/129‑1 (MQ=255) gtggcggcATTTGGCGAGTGTTAATCGGTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGTT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGc > 2:1917077/3‑150 (MQ=255) gcATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATaa > 1:5474967/1‑137 (MQ=255) aTTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAg > 2:1400996/1‑150 (MQ=255) aTTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAg < 2:6887906/150‑1 (MQ=255) aTTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAg > 2:9670724/1‑150 (MQ=255) aTTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCAGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAg > 2:4457270/1‑150 (MQ=255) tttGGCCTGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGt < 1:8703770/150‑1 (MQ=255) tttGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGt > 2:1127629/1‑150 (MQ=255) ttGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTg < 1:8410994/150‑1 (MQ=255) gCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTAc < 2:6297207/124‑1 (MQ=255) gCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGgcg > 1:4755850/1‑150 (MQ=255) ttAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTa > 1:9923392/1‑150 (MQ=255) aaTCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAg < 1:9004837/150‑1 (MQ=255) aaTCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAg > 2:5895546/1‑150 (MQ=255) gCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttg > 1:7553417/1‑150 (MQ=255) tGGGTTGCGGTTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttgtt < 1:6153571/150‑1 (MQ=255) tGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttgtt < 2:6119614/150‑1 (MQ=255) tGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttgtt < 2:5231901/150‑1 (MQ=255) ggTTGCGGTTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTtgttgt < 2:7844976/150‑1 (MQ=255) cGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAata > 2:8049419/1‑150 (MQ=255) ggTTTTTGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATAtt > 1:8812305/1‑150 (MQ=255) tttttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 2:7132890/150‑1 (MQ=255) tttttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 1:3318630/150‑1 (MQ=255) tttttGGGCGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 1:3623661/150‑1 (MQ=255) cGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAgg > 1:10253338/1‑126 (MQ=255) cGAGAAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCaaa < 2:9264747/150‑1 (MQ=255) gagaAAAACAGCGACTTGATGG‑CTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAat > 1:4395723/1‑150 (MQ=255) gagaAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAat > 2:8497363/1‑150 (MQ=255) gagaAAAACAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAat < 1:421846/150‑1 (MQ=255) aaaCAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTc > 1:2073220/1‑150 (MQ=255) aaaCAGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTc > 2:6595754/1‑150 (MQ=255) aGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAg > 1:9706828/1‑133 (MQ=255) aGCGACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAatat < 1:6528955/143‑1 (MQ=255) gACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGtt < 2:8339627/132‑1 (MQ=255) gACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGttt > 2:407371/1‑150 (MQ=255) gACTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGttt < 1:1089045/150‑1 (MQ=255) cTTGAT‑GTCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGc > 2:5539474/1‑150 (MQ=255) ttGAT‑GTCTCAAATCATCTTTTAATGATAATAATACTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGCt > 2:9804005/1‑150 (MQ=255) | GAAAATGCTGATGAAACCAGTCCCCAACCGAAGCGGGTTGCAGGGGAGTGGACGTCTCCGTGGGCGTAAAGGTTCCCATCTGAGGCGGCATTTGGCCAGTGTTAATCGCTGGGTTGCGGGTTTTTGGGCGAGAAAAACAGCGACTTGAT‑G‑CTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAGTTGCAAATATGTCGGTGTTTGCT > NC_002947/1011174‑1011466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |