| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5115118 = | 33 (1.220) | 6 (0.230) | 4/282 | 2.9 | 17.0% | coding (585/1419 nt) | aroP‑II | aromatic amino acid transport protein |
| ? | NC_002947 | 5115157 = | 27 (1.040) | coding (546/1419 nt) | aroP‑II | aromatic amino acid transport protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACGTGAAGTTCTTCGGTGAAGCCGAATTCTGGTTCGCCATCATCAAAGTGGTCGCCATCGTCAGCATGATCGGCCTGGGTGCCTACCTGCTGACCAGCGGCAGCGGCGGCCCTGAAGCCACCGTGGCCAACCTGTGGACACACGGCGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115270‑5115118‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttcAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCACGTTCATCAGGTTGATGGCGTTGATCAGCACGAAGAAG > NC_002947/5115157‑5115304 AACGTGAAGTTCTTCGGTGAAGCCGAATTCTGGTTCGCCATCATCACAGTGGTCACCATCGTCAGCATGATCGGCCTGGGTGCCTACCTGCTGACCAGCGGCAGCGGCGGCCCTGAAGCCACCGTGGCCAACCTGTGGACACACGGCGGC < 1:209129/150‑1 GAAGCCACCGTGGCCAACCTGTGGACACACGGCGGCTTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCAC > 2:252691/1‑150 GCCACCGTGGCCAACCTGTGGACACACGGCGGCTTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGAC > 1:430253/1‑99 GCCACCGTGGCCAACCTGTGGACACACGGCGGCTTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGAC > 1:430271/1‑99 GCCACCGTGGCCAACCTGTGGACACACGGCGGCTTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGAC < 2:430253/99‑1 GCCACCGTGGCCAACCTGTGGACACACGGCGGCTTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGAC < 2:430271/99‑1 GTGGACACACGGCGGCTTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCACGTTCATCAGGTTGATGGCGT < 1:252691/150‑1 CTTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCACGTTCATCAGGTTGATGGCGTTGATCAGCACGAAGA < 1:452598/150‑1 TTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCACGTTCATCAGGTTGATGGCGTTGATCAGCACGAAGAA > 2:103710/1‑150 TTCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCACGTTCATCAGGTTGATGGCGTTGATCAGCACGAAGAA > 2:538179/1‑150 TCAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCACGTTCATCAGGTTGATGGCGTTGATCAGCACGAAGAAG < 2:369546/150‑1 AACGTGAAGTTCTTCGGTGAAGCCGAATTCTGGTTCGCCATCATCAAAGTGGTCGCCATCGTCAGCATGATCGGCCTGGGTGCCTACCTGCTGACCAGCGGCAGCGGCGGCCCTGAAGCCACCGTGGCCAACCTGTGGACACACGGCGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115270‑5115118‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttcAGGGCCGCCGCTGCCGCTGGTCAGCAGGTAGGCACCCAGGCCGATCATGCTGACGATGGCGACCACTTTGATGATGGCGAACCAGAATTCGGCTTCACCGAAGAACTTCACGTTCATCAGGTTGATGGCGTTGATCAGCACGAAGAAG > NC_002947/5115157‑5115304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |