New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5748341 =	12 (0.440)	10 (0.410)	5/268	2.4	52.7%	intergenic (‑169/+78)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5748395 =	7 (0.280)					intergenic (‑223/+24)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase

GAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGT  >  NC_002947/5748247‑5748534                                                                                                                                                     |                                                                                                                                            gagaCTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGCAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCggg                                                                                                                                            <  2:483032/150‑1 (MQ=255)      tCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGc                                                                                                                                       >  1:497535/1‑150 (MQ=255)                                          ccaccgagatctggaaggcattggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGccc                                                                                                                                     <  2:501145‑M2/9‑1 (MQ=255)                                          ccaccgagatctggaaggcattggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGccc                                                                                                                                     <  2:501141‑M2/9‑1 (MQ=255)                                          ccaccgagatctggaaggcattggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGccc                                                                                                                                     <  2:501164‑M2/9‑1 (MQ=255)                                          ccaccgagatctggaaggcattggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGccc                                                                                                                                     >  1:501141‑M2/108‑116 (MQ=255)                                          ccaccgagatctggaaggcattggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaaggcatgcgctgtacctgtgggagcgGGCGTGccc                                                                                                                                     >  1:501145‑M2/108‑116 (MQ=255)                                          ccaccgagatctggaaggcattggattgaggtgaggccgttcgcgggcacgcccgctcccacaggtgtctcgcaagcttcaacgcttgcgctgtacctgtgggagcgGGCGTGccc                                                                                                                                     >  1:501164‑M2/108‑116 (MQ=255)                                                                                      gggcacgccCGCTCCCACAGGTACAGCGCATGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                                         >  1:501145‑M1/10‑116 (MQ=255)                                                                                      gggcacgccCGCTCCCACAGGTACAGCGCAAGCGTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                                         >  1:501164‑M1/10‑116 (MQ=255)                                                                                      gggcacgccCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                                         >  1:501141‑M1/10‑116 (MQ=255)                                                                                      gggcacgccCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                                         <  2:501145‑M1/107‑1 (MQ=255)                                                                                      gggcacgccCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                                         <  2:501164‑M1/107‑1 (MQ=255)                                                                                      gggcacgccCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                                         <  2:501141‑M1/107‑1 (MQ=255)                                                                                             cgCGCCCCCACAGTCACCCCCCAAGCCTTTAACCTCGCTATACACCTGTGGTAGCGGGCGGGCCCGCCAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATc                                                >  1:157399‑M1/3‑150 (MQ=255)                                                                                                        AGGTACAGCGCACGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGtt                                     >  2:485097‑M1/1‑150 (MQ=255)                                                                                                        AGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGtt                                     <  1:323948‑M1/150‑1 (MQ=255)                                                                                                            gtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAAt                                                                            <  1:483998‑M2/66‑1 (MQ=255)                                                                                                            gtctcgcaagcttcaaggcttgcgctgtacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAAt                                                                            >  2:483998‑M2/42‑107 (MQ=255)                                                                                                               tcgcaagcttcaaggcttgcgcgacacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCCTATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGGGGTCAATAcc                              >  2:142237‑M2/39‑150 (MQ=255)                                                                                                               tcgcaagcttcaaggcttgcgagacacctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATAcc                              >  1:25938‑M2/39‑150 (MQ=255)                                                                                                                   aaGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCt                          >  1:157442/1‑150 (MQ=255)                                                                                                                   aaGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCt                          <  2:497535/150‑1 (MQ=255)                                                                                                                      ccTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTgc                       >  1:509748/1‑150 (MQ=255)                                                                                                                         tGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGcc                    >  2:229283/1‑150 (MQ=255)                                                                                                                                tGCGCGACACCTGTGGGCGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTc             <  1:546357/150‑1 (MQ=255)                                                                                                                                        acctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGGGGCATAGTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGGGTTCACTACCGCCGTGCGCCACCACTCCTgcgggg     >  2:526816‑M2/14‑148 (MQ=255)                                                                                                                                          ctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGgtgtg   >  1:576343‑M2/12‑150 (MQ=255)                                                                                                                                           tgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGgtgtgt  >  1:462391‑M2/11‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                            GAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGT  >  NC_002947/5748247‑5748534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.